How flexible are cell identities? This problem has fascinated developmental biologists for several centuries and can be traced back to Abraham Trembley's pioneering manipulations of Hydra to test its regeneration abilities in the 1700s. Since the cell theory in the mid-nineteenth century, developmental biology has been dominated by a single framework in which embryonic cells are committed to specific cell fates, progressively and irreversibly acquiring their differentiated identities. This hierarchical, unidirectional and irreversible view of cell identity has been challenged in the past decades through accumulative evidence that many cell types are more plastic than previously thought, even in intact organisms.The paradigm shift introduced by such plasticity calls into question several other key traditional concepts, such as how to define a differentiated cell or more generally cellular identity, and has brought new concepts, such as distinct cellular states. In this review, we want to contribute to this representation by attempting to clarify the conceptual and theoretical frameworks of cell plasticity and identity. In the context of these new frameworks we describe here an atlas of natural plasticity of the cell identity in C. elegans, including our current understanding of the cellular and molecular mechanisms at play. The worm further provides interesting cases at the borderlines of cellular plasticity that highlight the conceptual challenges still ahead. We then discuss a set of future questions and perspectives arising from the studies of natural plasticity in the worm, that are shared with other reprogramming and plasticity events across phyla.
Part 1: IntroductionThe study of cellular plasticity is the study of changes in cellular identities. In this section we will discuss the notion of cellular identity in the animal kingdom with an emphasis on the nematode Caenorhabditis elegans. We will start by discussing how to consensually define it, the conceptual steps describing its acquisition during development and what cellular plasticity entails (Fig. 1A). We will place particular focus on cellular plasticity events involving the swap of differentiated identities.
-How to define cellular identity?Historically, cell types have been identified on the basis of their morphology, location, function and where possible, cell lineage. In the last 40 years, the focus moved first towards using molecular markers, notably through in vivo visualisation using fluorescent fusion constructs (Chalfie et al., 1994;