The human platelet alloantigen 9bw (HPA-9bw, Max a ) is an epitope of GPIIb and differs by 2602G>A single nucleotide polymorphism (SNP), resulting in a Val/Met substitution at amino acid 837 (Noris et al., 1995). Alloantibodies against Max a are involved in the development of neonatal alloimmune thrombocytopenia (NAIT) (Kaplan et al., 2005;Raj et al., 2009). The frequency of HPA-9b allele is low at 0·003 in the Dutch population (Noris et al., 1995), 0·002 in United States (Peterson et al., 2005) and 0·0 in China (Xu et al., 2009). However, Peterson and coworkers found six cases involving alloantibodies anti-HPA-9bw among 217 cases not resolved on NAIT, suggesting that HPA-9bw may be the third most important trigger for NAIT, after HPA-1a and HPA-5b (Peterson et al., 2005). In such studies, HPA-3b allele was present in all individuals with HPA-9b allele.The HPA frequencies vary among distinct populations. In the literature, there are no data for the allelic frequencies of HPA-9 system in the South American population. In this study, we used the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method to determine the HPA-9 and HPA-3 allelic frequencies in Brazilian blood donors and Amazon Indians. The study was approved by the University Research Ethics Committee (CEP 0793/08). Blood samples from 1073 unrelated Brazilian blood donors and 120 Amazon Indians (Xikrin Kayapo Indians) were collected. DNA was isolated using a commercial kit (QIAamp DNA Blood mini kit, Qiagen, Hilden, Germany) and genotyped by PCR-RFLP using BstNI restriction enzyme for HPA-9 and Fok I for HPA-3. Control samples were used and we performed the sequencing in selected samples containing the SNPs to confirm the region studied.The results of genotype and allelic frequencies of HPA-9 and HPA-3 systems in Brazilian blood donors and Xikrin Indians are shown in Table 1. We found that the frequencies of the genotypes HPA-9a/9a, 9a/9b and 9b/9b were 99·72, 0·28 and 0% in Brazilian blood donors and 100, 0 and 0% in Amazon Indians, respectively. HPA-3a/3a, 3a/3b and 3b/3b had frequencies of 41·29, 46·50 and 12·21% in Brazilian blood donors and 41·67, 52·50 and 5·83% in Amazon Indians. The analysis by statistical χ 2 with significance level of 0·05 showed that no statistically significant differences were found regarding the HPA-9a, HPA-9b, HPA-3a and HPA-3b allelic frequencies between Brazilian blood donors (0·999, 0·001, 0·645, 0·355) and Xikrin Indians (1·0, 0·0, 0·679, 0·321). Using sequencing methods for selected samples we confirmed the corresponding SNPs; however, we did not find any other polymorphisms such as those described by the study of Hallé and coworkers in which they found mutations on GPIIb exon 26 (2614C>A and 2645C>T) and intron 26 (IVS26+89G>A) (Hallé et al., 2008). All individuals carrying the HPA-9b allele also had the HPA-3b allele.The HPA-9 allelic frequencies found in Brazilians are quite similar to those reported by studies performed with Dutch, North American and Chinese individuals as mentioned e...