“…Unlike man-made (i.e., "engineered") systems, which are typically built up by successively refining a basic system, often by increasing its complexity, biological systems generally present in a complex form and computational models are essential for deconstructing them (Endy and Brent, 2001;Kitano, 2002). Another important feature of a computational model is that, unlike an experiment, it allows one to consider a system that contains only components specified by the user, making possible definitive statements regarding the capacity of specific structures to drive particular actions (Clausi and Brodland, 1993;Taber et al, 1995;Davidson et al, 1999;Chen and Brodland, 2000;Brodland and Chen, 2000;Palsson, 2001;Brodland, 2002;Brodland and Veldhuis, 2002;Brodland, 2003;Brodland, 2004;Brodland and Wiebe, 2004).…”