GABA B receptors are heterodimers of two subunits, GABA B1 (GB1) and GABA B2 (GB2). Agonists such as GABA and baclofen bind to the GB1 subunit only, whereas GB2 is essential for G protein activation. Positive allosteric modulators enhance the potency and efficacy of agonists at GABA B receptors and are of particular interest because they lack the sedative and muscle relaxant properties of agonists. In this study, we aimed to characterize the interaction of the positive modulator N,NЈ-dicyclopentyl-2-methylsulfanyl-5-nitro-pyrimidine-4,6-diamine (GS39783) with the GABA B receptor heterodimer. Using functional guanosine 5Ј-O-(3-[35 S]thio)triphosphate binding assays, we observed positive modulation by GS39783 in different vertebrate species but not in Drosophila melanogaster. However, coexpression of D. melanogaster GB1 with rat GB2 yielded functional receptors positively modulated by GS39783. Together with data from rat/D. melanogaster GB2 subunit chimeras, this pointed to a critical role of the GB2 transmembrane region for positive modulation. We further characterized GS39783 function using point mutations. GS39783 positively modulated GABA responses but also showed considerable agonistic activity at heterodimers containing a mutant rat GB2 subunit with three amino acid substitutions in transmembrane domain VI. It was surprising that in contrast to wild-type rat GB2, this mutant subunit was also activated by GS39783 when expressed without GB1. The mutations of both G706T and A708P are necessary and sufficient for activation and identify a key region for the effect of GS39783 in the GB2 transmembrane region. Our data show that mutations of specific amino acids in GB2 can induce agonism in addition to positive modulation and facilitate GB2 activation in the absence of GB1.GABA B receptors are the metabotropic receptors for GABA and modulate inhibitory and excitatory neurotransmission . Presynaptic GABA B receptors, via inhibition of Ca 2ϩ channels, inhibit the release of several neurotransmitters and neuropeptides whereas postsynaptically located receptors activate potassium channels and induce slow inhibitory postsynaptic potentials. GABA B receptors belong to the family C of G protein-coupled receptors (GPCRs) with the agonist binding pocket being constituted by the large N-terminal extracellular domain (ECD). Native GABA B receptors are heterodimers composed of two subunits, GABA B1 (GB1) and GABA B2 (GB2). The receptors are exceptional among GPCR heterodimers in that only one subunit, GB1, constitutes the GABA binding domain, whereas activation of G proteins is mediated only through the second subunit, GB2. Mutagenesis studies and the lack of evolutionary conservation suggest that the ECD of GB2 does not form a binding pocket for a natural ligand (Kniazeff et al., 2002).