12Sclerotinia sclerotiorum induces host reactive oxygen species (ROS) production, which leads to necrosis 13 in the host, allowing the pathogen to absorb nutrients from the dead tissues. Here, we found that three S. 14 sclerotiorum genes involved in copper ion import/transport, SsCTR1, SsCCS and SsATX1, were 15 significantly up-regulated during infection of Brassica oleracea. Function analysis revealed that these 16 genes involved in fungal ROS detoxification, oxalic acid production, pathogen establishment and 17 virulence. On the host side, four genes putatively involved in copper ion homeostasis, BolCCS, BolCCH, 18 BolMT2A and BolDRT112, were significantly down-regulated in susceptible B. oleracea, but stably 19 expressed in resistant B. oleracea during infection. Their homologs were found to promote resistance to 20 necrotrophic pathogens and increase antioxidant activity in Arabidopsis thaliana. Furthermore, copper 21 concentration analysis indicated that copper is transported into the necrotic area from healthy area 22 during infection. Collectively, our data suggest that S. sclerotiorum hijacks host copper to detoxify ROS, 23 whereas the resistant hosts restrict the supply of essential copper nutrients to S. sclerotiorum by 24 maintaining copper ion homeostasis during infection. 25 26 27 28 65detoxification enzymes during infection by enhancing the expression of genes involved in copper ion 66 import and transport, and that resistant hosts limit the supply of copper to S. sclerotiorum by maintaining 67 copper ion homeostasis. This research provides new insights into the interaction between S. sclerotiorum 68 and the host, highlighting the importance of ROS and copper in these interactions. 69 70 5
Results
71Copper is involved in the interaction between Brassica oleracea and S. sclerotiorum 72 S. sclerotiorum induces typical lesions, which are the main battlegrounds of gene interactions between S. 73 sclerotiorum and the host. We previously detected differentially expressed genes (DEGs) by comparing 74 gene expression in lesions of resistant and susceptible F 2 plants of B. oleracea (Ding et al, 2019). Here, 75 the set of transcriptome data was analyzed for dynamic changes of gene expression in sclerotinia and 76 hosts during infection. A total of 738 and 228 S. sclerotiorum DEGs (24 hours post inoculation [hpi] vs 77 12 hpi) were detected in lesions of resistant and susceptible B. oleracea, respectively ( Fig EV1A), which 78 were significantly enriched for three overlapping Gene Ontology (GO) terms, 'oxidation-reduction 79 process', 'copper ion transport' and 'copper ion import' (Fig 1A). Eight S. sclerotiorum DEGs involved 80 in the 'copper ion transport' and 'copper ion import' processes were up-regulated during infection as 81 revealed by both RNA-seq analysis and qRT-PCR analysis (Figs EV1B and Appendix Figure S1A).
82A total of 5988 and 5441 DEGs (24 hpi vs 12 hpi) were detected and subjected to GO analysis in 83 resistant and susceptible B. oleracea stems, respectively ( Fig EV1C). Inter...