Aminergic receptors are G protein-coupled receptors (GPCRs)
that
transduce signals from small endogenous biogenic amines to regulate
intracellular signaling pathways. Agonist binding in the ligand binding
pocket on the extracellular side opens and prepares a cavity on the
intracellular face of the receptors to interact with and activate
G proteins and β-arrestins. Here, by reviewing and analyzing
all available aminergic receptor structures, we seek to identify activation-related
conformational changes that are independent of the specific scaffold
of the bound agonist, which we define as “activation conformational
changes” (ACCs). While some common intracellular ACCs have
been well-documented, identifying common extracellular ACCs, including
those in the ligand binding pocket, is complicated by local adjustments
to different ligand scaffolds. Our analysis shows no common ACCs at
the extracellular ends of the transmembrane helices. Furthermore,
the restricted access to the ligand binding pocket identified previously
in some receptors is not universal. Notably, the Trp6.48 toggle switch and the Pro5.50-Ile3.40-Phe6.44 (PIF) motif at the bottom of the ligand binding pocket
have previously been proposed to mediate the conformational consequences
of ligand binding to the intracellular side of the receptors. Our
analysis shows that common ACCs in the ligand binding pocket are associated
with the PIF motif and nearby residues, including Trp6.48, but fails to support a shared rotamer toggle associated with activation.
However, we identify two common rearrangements between the extracellular
and middle subsegments, and propose a novel “activation switch”
motif common to all aminergic receptors. This motif includes the middle
subsegments of transmembrane helices 3, 5, and 6 and integrates both
the PIF motif and Trp6.48.