The pathogenesis of idiopathic pulmonary arterial hypertension (PAH) remains poorly understood. The present authors recently reported that mice with vasoactive intestinal peptide (VIP) gene disruption show a spontaneous phenotype of PAH, with pulmonary vascular remodelling and lung inflammation.To explore the underlying molecular mechanisms in this model, it was examined whether absence of the VIP gene might alter the expression of additional genes involved in the pathogenesis of PAH, as single-gene deletions, in the absence of hypoxia, rarely result in significant pulmonary vascular remodelling.Lung tissue from mice with targeted disruption of the vasoactive intestinal peptide gene (VIP -/-mice) and from control mice was subjected to whole-genome gene microarray analysis, and the results validated with quantitative, real-time PCR. Lungs from VIP -/-mice showed a wide range of significant gene expression alterations, including overexpression of genes that promote pulmonary vascular smooth muscle cell proliferation, underexpression of antiproliferative genes and upregulation of pro-inflammatory genes.In conclusion, vasoactive intestinal peptide is a pivotal modulator of genes controlling the pulmonary vasculature, its deficiency alone resulting in gene expression alterations that can readily explain both the vascular remodelling and associated inflammatory response in pulmonary arterial hypertension. The present findings shed more light on the molecular mechanisms of pulmonary arterial hypertension, and could lead to better understanding of the pathogenesis of human pulmonary arterial hypertension, and hence to improved therapy. KEYWORDS: Gene expression and regulation, pulmonary hypertension, quantitative PCR, right heart failure T he present authors recently described a model of pulmonary hypertension in airbreathing, nonhypoxaemic mice with targeted disruption of the vasoactive intestinal peptide (VIP) gene (VIP -/-mice) [1]. The pulmonary vascular abnormalities in these mice, notably pulmonary vascular smooth muscle and collagen proliferation, and right ventricular (RV) hypertrophy are reminiscent of those seen in idiopathic pulmonary arterial hypertension (IPAH). There was also evidence of lung inflammation, which may contribute to the pathogenesis of IPAH. Both the vascular remodelling and inflammation were markedly attenuated by VIP replacement [1]. This mouse model, however, differs from the human disease in several respects: 1) pulmonary hypertension is of a moderate degree; 2) despite often pronounced medial thickening, intimal proliferation and plexiform lesions are not observed; and 3) in contrast to the clinical condition, the mouse phenotype is more prominently expressed in males than in females.The purpose of the present study was to uncover the molecular mechanisms by which disruption of the VIP gene could lead to expression of pulmonary arterial hypertension (PAH), pulmonary vascular remodelling, RV hypertrophy and lung inflammation. VIP has long been identified as a pulmonary, as well ...