Germ cells are vital for reproduction and heredity. However, the mechanisms underlying female germ cell development in primates, especially in late embryonic stages, 2 5remain elusive. Here, we performed single-cell RNA sequencing of 12471 cells from whole fetal ovaries, and explored the communications between germ cells and niche cells. We depicted the two waves of oogenesis at single cell resolution and demonstrated that progenitor theca cells exhibit similar characteristics to Leydig cells in fetal monkey ovaries. Notably, we found that ZGLP1 displays differentially expressed patterns between mouse and monkey, 3 0 which is not overlapped with NANOG in monkey germ cells, suggesting its role in meiosis entry but not in activating oogenic program in primates. Furthermore, the majority of germ cell clusters that highly expressed PRDM9 and SPO11 might undergo apoptosis after cyst breakdown, leading to germ cell attrition. Overall, our work provides new insights into the molecular and cellular basis of primate fetal ovary development at single-cell resolution. 3 5 oogonia proliferation, meiosis initiation, germ cell attrition and primordial follicle formation, which are accompanied with dynamic chromatin repackaging and transcriptional regulation. Moreover, female germ cells initiate meiosis asynchronously in a wave from anterior to 4 5 posterior, which results in the heterogeneity of germ cell populations in a fetal ovary 1 . Somatic progenitor cells in XX gonads will adopt the ovary specific cell fate after sex determination, which leads to their differentiation as granulosa cells in supporting cell populations or as theca cells in steroidogenic cell populations 2 . Interestingly, the female germ cell fate mainly relies on the ovarian environments established by somatic cells rather than the 5 0 sex chromosomes in germ cells 3 . Despite the mass data produced in recent years on fetal ovary development 4-6 , several important questions regarding the key developmental events, such as two waves of oogenesis, female germ cell attrition and primordial follicle formation, have not been fully demonstrated, especially in non-human primates. In addition, although the origins of germ cells and 5 5 granulosa cells are well established 2, 7 , the origin of theca cells in primates remains unknown. Furthermore, the germline-niche communications through signaling pathways for critical events during fetal ovary development are poorly integrated. Single cell RNA sequencing approach can efficiently identify cell types, uncover heterogeneity and construct developmental trajectories, which is well suited for exploring 6 0 fetal ovary development. To further improve our understanding on the germ cell development and somatic cell differentiation, we here performed single-cell RNA sequencing of fetal monkey ovarian cells, especially in late embryonic stages, through 10× Genomics Chromium 4 platform. And a transcriptional cell atlas of all cell types in the fetal ovary was established. 6 5
RESULTS
Identification of the ovarian cell types...