Matrix metalloproteinases (MMPs) are important for many different types of cancer-related processes, including metastasis. Understanding the functional impact of changes in MMP activity during cancer treatment is an important facet not typically evaluated as part of preclinical research. With MMP activity being a critical component of the metastatic cascade, we designed a 3D hydrogel system to probe whether pharmacological inhibition affected human melanoma cell proteolytic activity; metastatic melanoma is a highly aggressive and drug-resistant form of skin cancer. The relationship between MMP activity and drug treatment is unknown, and therefore we used an in situ fluorogenic MMP sensor peptide to determine how drug treatment affects melanoma cell MMP activity in three dimensions. We encapsulated melanoma cells from varying stages of progression within PEG-based hydrogels to examine the relationship between drug treatment and MMP activity. From these results, a metastatic melanoma cell line (A375) and two inhibitors that inhibit RAF (PLX4032 and sorafenib) were studied further to determine whether changes in MMP activity led to a functional change in cell behavior. A375 cells exhibited increased MMP activity despite an overall decrease in metabolic activity with PLX4032 treatment. The changes in proteolytic activity correlated with increased cell elongation and increased single-cell migration. In contrast, sorafenib did not alter MMP activity or cell motility, showing that the changes induced by PLX4032 were not a universal response to small-molecule inhibition. Therefore, we argue the importance of studying MMP activity with drug treatment and its possible implications for unwanted side effects.hydrogel | cancer | matrix metalloproteinase | cell motility | BRAF/MEK P roteolytic cleavage of the tumor microenvironment is an important mediator of cancer metastasis, which is the primary cause of mortality in cancer patients. Remodeling of the local environment involves a complex balance of cellularly secreted enzymes that promote and inhibit matrix degradation (reviewed in ref. 1). As part of this process, the matrix metalloproteinase (MMP) family of zinc-dependent enzymes plays a key role in this remodeling by degrading extracellular matrix (ECM) proteins, which promotes tumor cell invasion and colonization of distant metastatic sites, stimulates blood vessel infiltration, and releases numerous growth factors (2-6). MMP expression is elevated in nearly all solid tumors, including breast, colon, pancreas, and melanoma, and increased expression is often correlated with decreased survival (7). Additionally, targeted overexpression of MMP-3, -7, or -14 in vivo results in increased mammary carcinogenesis (8), and several knockout mouse models have decreased tumor incidence, angiogenesis, and metastasis (9).Although clearly important during cancer progression, MMP activity is not routinely evaluated during in vitro preclinical screening for potential cancer therapeutics. This is due partly to the many layers of regulat...