Membrane biofouling is the consequence of the deposition of microorganisms on polymer membrane surfaces. Polymeric membranes have garnered more attention for filtering and purifying water because of their ease of handling, low cost, effortless surface modification, and mechanical, chemical, and thermal properties. The sizes of the pores in the membranes enable micro- and nanofiltration, ultrafiltration, and reverse osmosis. Commonly used polymers for water filter membranes are polyvinyl chloride (PVA), polyvinylidene fluoride (PVDF), polyamide (PA), polyethylene glycol (PEG), polyethersulfone (PES), polyimide (PI), polyacrylonitrile (PAN), polyvinyl alcohol (PA), poly (methacrylic acid) (PMAA), polyaniline nanoparticles (PANI), poly (arylene ether ketone) (PAEK), polyvinylidene fluoride polysulfone (PSF), poly (ether imide) (PEI), etc. However, these polymer membranes are often susceptible to biofouling because of inorganic, organic, and microbial fouling, which deteriorates the membranes and minimizes their lives, and increases operating costs. Biofouling infection on polymer membranes is responsible for many chronic diseases in humans. This contamination cannot be eliminated by periodic pre- or post-treatment processes using biocides and other chemicals. For this reason, it is imperative to modify polymer membranes by surface treatments to enhance their efficiency and longevity. The main objective of this manuscript is to discuss application-oriented approaches to control biofouling on polymer membranes using various surface treatment methods, including nanomaterials and fouling characterizations utilizing advanced microscopy and spectroscopy techniques.