Recent publications regarding the role of mesencephalic astrocyte‐derived neurotrophic factor (MANF) in various metabolic and degenerative disorders suggest that MANF is both a marker of disease and a possible therapeutic agent. We investigate the role of plasma MANF levels in patients in intensive care units (ICUs) receiving voriconazole (VCZ) therapy while also comparing MANF levels in healthy individuals. A single‐center prospective study was conducted. The plasma MANF level in patients in ICU was found to have high interindividual variability and was significantly higher than that in healthy controls (P < .01). Compared with patients using VCZ only, patients using both VCZ and amikacin had 3‐fold lower MANF concentrations (P < .05). The MANF concentrations also decreased when alkaline phosphatase (ALP) and serum creatinine levels were above the upper limits of the normal range (P < .05) and the estimated glomerular filtration rate (eGFR) was below the lower limit of the normal range (P < .01). Receiver operating characteristic curve analysis indicated that low MANF levels were associated with high ALP levels, high creatinine levels, and low eGFR. The cut‐off value of MANF for ALP levels higher than 126 U/L was 0.35 ng/mL (area under curve, AUC = 0.62, 95%CI = 0.50–0.74, P = .044); for serum creatinine levels higher than 104 μmol/L, the cut‐off value was 0.41 ng/mL (AUC = 0.74, 95%CI = 0.62–0.87, P = .001); and for eGFR below 80 mL/min, the cut‐off value was 0.75 ng/mL (AUC = 0.70, 95%CI = 0.59–0.81, P = .002). Monitoring plasma MANF levels may be of value for clinical decision‐making regarding the choice of antibiotics and the prediction of impaired liver function and renal function in patients admitted to an ICU.