2023
DOI: 10.1038/s41574-023-00805-8
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Metabolism and exercise: the skeletal muscle clock takes centre stage

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Cited by 24 publications
(13 citation statements)
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“…As a start we identified 1217 differentially expressed genes (DEGs; q < 0.05) between the sedentary control vs. sedentary iMSBmal1 KO mice; 535 that were upregulated and 682 that were downregulated with muscle specific Bmal1 knockout respectively. As seen in the volcano plot (Supplementary Figure 4A) and consistent with prior studies[5,8,9,28], many of the clock output genes, such as Dbp , Ppargc1a (Pgc1a) , Mylk4 , and Tcap were significantly down-regulated[34,35]. Motif analysis of the promoters of the 682 down-regulated genes determined that there was significant enrichment for E-boxes, and these include several circadian clock (CLOCK, NPAS2) specific E-boxes, as well as MYC specific E-box sequences.…”
Section: Resultssupporting
confidence: 91%
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“…As a start we identified 1217 differentially expressed genes (DEGs; q < 0.05) between the sedentary control vs. sedentary iMSBmal1 KO mice; 535 that were upregulated and 682 that were downregulated with muscle specific Bmal1 knockout respectively. As seen in the volcano plot (Supplementary Figure 4A) and consistent with prior studies[5,8,9,28], many of the clock output genes, such as Dbp , Ppargc1a (Pgc1a) , Mylk4 , and Tcap were significantly down-regulated[34,35]. Motif analysis of the promoters of the 682 down-regulated genes determined that there was significant enrichment for E-boxes, and these include several circadian clock (CLOCK, NPAS2) specific E-boxes, as well as MYC specific E-box sequences.…”
Section: Resultssupporting
confidence: 91%
“…Subsequent KEGG pathway analysis of the DEGs confirmed significant dysregulation of genes associated with 'circadian rhythms' (14 genes), as well as a large number of pathways relating to substrate metabolism, (Supplementary Figure 6C). Within this pathway, we identified dysregulation of transcripts essential for glucose and glycogen homeostasis including (Hk2, Rab10, Slc2a3, Slc2a4, Tbc1d1, Aldoc, Fbp2, Gbe1, Pgm1, Pgm2, Phka1, Pygm) as previously reported [4][5][6].…”
Section: Resultssupporting
confidence: 66%
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“…Over the past decades, the cellular and molecular effects of physical activity on skeletal muscle and the rest of the body have been investigated thoroughly and it has become evident that nearly every known aspect of this physiological response is intertwined with circadian rhythmicity ( 11 ). Bennet and Sato reviewed the current understanding of how exercise as an external cue is integrated with these internal circadian physiological processes to maintain metabolic homeostasis, identifying the opportunity to further research the role of “exerkines” (exercise-induced signaling molecules) and transcription factors that may constitute pharmacological targets.…”
Section: Exercise Timing In Cardiometabolic Healthmentioning
confidence: 99%