One of the early steps in the biosynthesis of coenzyme F 420 in Methanocaldococcus jannaschii requires generation of 2-phospho-L-lactate, which is formed by the phosphorylation of L-lactate. Preliminary studies had shown that L-lactate in M. jannaschii is not derived from pyruvate, and thus an alternate pathway(s) for its formation was examined. Here we report that L-lactate is formed by the NAD ؉ -dependent oxidation of L-lactaldehyde by the MJ1411 gene product. The lactaldehyde, in turn, was found to be generated either by the NAD(P)H reduction of methylglyoxal or by the aldol cleavage of fuculose-1-phosphate by fuculose-1-phosphate aldolase, the MJ1418 gene product.Coenzyme F 420 is an important cofactor involved in hydride transfer reactions in methanogenic archaea as well as methanotrophic and other bacteria. Although coenzyme F 420 contains a deazaflavin moiety, it is biochemically analogous to the nicotinamide cofactors. Coenzyme F 420 is involved in a variety of biochemical transformations, including methanogenesis (12), DNA photorepair (16), and degradation of nitrophenols (15) and nitroimidazofurans (49), and in the biosynthesis of several secondary metabolites (44).The biosynthetic pathway for the generation of the side chain of coenzyme F 420 begins with the formation of 2-phospho-L-lactate from L-lactate by a presently unknown kinase. The 2-phospho-L-lactate is then condensed with GTP to form lactyl (2)diphospho-(5Ј)guanosine (LPPG) and pyrophosphate (21). The second component of F 420 , Fo, is generated from 4-hydroxyphenylpyruvate and 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione by CofGH (20). F 420 -0 is formed from the condensation of lactyl-phosphate (from LPPG) with Fo by 2-phospho-L-lactate transferase (CofD) (24). F 420 biosynthesis then proceeds through the addition of two ␥-linked glutamate residues by CofE, forming F 420 -2 (33). Finally, CofF catalyzes the ligation of a final ␣-linked glutamate residue to the terminal ␥-linked glutamate to generate F 420 (34).Establishing the biosynthetic origin of L-lactate used in the formation of F 420 in archaea (23,24,33,34) has been challenging. Although this central metabolite is quite small and simple in structure, a number of experiments in our laboratory were unable to initially identify the metabolic origins of the lactate in Methanocaldococcus jannaschii. There are several known biochemical pathways leading to lactate. Previous attempts to establish its origin via reduction of pyruvate proved negative (25). Several recombinant enzymes from M. jannaschii were tested for this activity, and none were found to work, despite the fact that one of the enzymes was annotated as a lactate dehydrogenase (25). One of these enzymes, MdhI, encoded by MJ1425, was found to catalyze the formation of lactate but only at very low levels when incubated with high concentrations of pyruvate (22).Here we report the identification of the pathway for the formation of lactate in M. jannaschii. Lactate was found to be formed by the NAD-dependent oxidation of lacta...