“…Given that application of metabolomics technology to epidemiological studies is an emerging field, we conducted a survey of participating COMETS cohort representatives to gain insights into the strategies and procedures used for analyzing metabolomics data, including data pre-processing, analysis, and reporting of results. With a range of experience levels analyzing metabolomics data, participating COMETS cohorts have analyzed and published on both targeted and untargeted metabolomics data from a variety of study designs in relation to disease risk factors [8,18,19,20,21,22,23,24,25,26,27] and many disease outcomes, predominantly cancer, CVD, and diabetes [28,29,30,31,32,33,34,35,36,37,38,39,40]. However, there was little consensus on approaches to data pre-processing, statistical analysis or reporting of results, which is echoed in the broader metabolomics community [13].…”