This paper reports the construction of racemic and enantiopure (D‐ and L‐) fluorene and fluorenone‐based novel unnatural amino acid derivatives. The Pd(II)‐catalyzed bidentate directing group‐aided arylation of prochiral β‐C(sp3)‐H bonds in racemic, enantiopure carboxamides of amino acids with iodofluorenes was reported. The construction of novel examples of fluorene and fluorenone motifs containing amino acids comprising of norvaline, leucine, phenylalanine, norleucine, 2‐aminooctanoic acid derivatives having the anti‐stereochemistry (with good enantiopurity) was accomplished. The construction of bis fluorenyl alanine scaffolds and fluorenyl motif‐containing non‐α‐amino acid (aminoalkanoic acid) derivatives was also reported. Examples of removal of the directing group (8‐aminoquinoline) and phthalimide‐protecting group present in the fluorenyl‐based unnatural amino acid derivatives have been shown. Accordingly, fluorene motif‐based amino acid esters and free amino group‐containing unnatural amino acid derivatives were synthesized. The stereochemistry of the major (anti) diastereomers obtained via the prochiral β‐C(sp3)‐H arylation of norvaline, leucine, phenylalanine, norleucine, 2‐aminooctanoic acid derivatives was ascertained from the X‐ray structure of a representative compound. Fluorene‐ and fluorenone‐based motifs are vital skeletons in materials and medicinal chemistry research. Accordingly, this work is a contribution towards enriching the library of fluorene and fluorenone unnatural amino acid scaffolds.