The current definition of coliform bacteria is method dependent, and when different culture-based methods are used, discrepancies in results can occur and affect the accuracy of identification of true coliforms. This study used an alternative approach to the identification of true coliforms by combining the phenotypic traits of the coliform isolates and the phylogenetic affiliation of 16S rRNA gene sequences with the use of lacZ and uidA genes. A collection of 1,404 isolates detected by 12 U.S. Environmental Protection Agency-approved coliform-testing methods were characterized based on their phylogenetic affiliations and responses to their original isolation media and lauryl tryptose broth, m-Endo, and MI agar media. Isolates were phylogenetically classified into 32 true-coliform, or targeted Enterobacteriaceae (TE), groups and 14 noncoliform, or nontargeted Enterobacteriaceae (NTE), groups. It was shown statistically that detecting true-positive (TP) events is more challenging than detecting true-negative (TN) events. Furthermore, most false-negative (FN) events were associated with four TE groups (i.e., Serratia group I and the Providencia, Proteus, and Morganella groups) and most false-positive (FP) events with two NTE groups, the Aeromonas and Plesiomonas groups. In Escherichia coli testing, 18 out of 145 E. coli isolates identified by enzymatic methods were validated as FN. The reasons behind the FP and FN reactions could be explained through analysis of the lacZ and uidA genes. Overall, combining the analyses of the 16S rRNA, lacZ, and uidA genes with the growth responses of TE and NTE on culture-based media is an effective way to evaluate the performance of coliform detection methods.
Total coliform bacteria and Escherichia coli are considered costeffective bacterial indicators for the protection of public health. Detectable total coliforms indicate potential contamination associated with the water distribution system, while E. coli is a good indicator of fecal contamination, with a health goal (i.e., maximum contaminant level goal [MCLG]) of zero under the Revised Total Coliform Rule (RTCR) (1). When a positive result of total-coliform testing is observed, public water systems (PWSs) are required to collect and analyze three repeat samples (1). A system assessment is required when a PWS exceeds a specific frequency of total-coliform occurrence. When an E. coli maximum contaminant level (MCL) violation incurs, a PWS must have an assessment performed by the state or a state-approved entity and must correct any sanitary defects (1). False-positive (FP) results for either total-coliform or E. coli tests impose an unnecessary burden on water utilities. On the other hand, false-negative (FN) results expose consumers to potential health threats and delay response times for effective action. Therefore, accurate detection of total coliforms and E. coli in drinking water systems is crucial for both water utilities and consumers.To date, the U.S. EPA has approved 12 methods for the detection of coliform bacteria i...