The increasing environmental concerns associated with textile dye pollution necessitate the development of sustainable and eco-friendly treatment methods. Among various natural biosorbents, Avicennia marina (true mangrove) emerges as a promising candidate due to its robust growth in coastal ecosystems and its potential for dye adsorption. This research delves into the feasibility of employing A. marina as a green biosorbent for the decolorization of methyl red (MR), a prevalent textile dye. Through comprehensive experimentation, we examined the effects of various parameters, including the contact time (20–120 min), pH (1–10), temperature, dose (25–150 g/L), and initial dye concentration (20–600 mg/L), on the adsorption capacity of the biosorbent. Characterization of the prepared biosorbent was done using atomic force microscopy(AFM), scanning electron microscopy (SEM), Fourier-transform infrared spectroscopy (FTIR), and X-ray diffraction analysis (XRD). The FTIR results show phenobarbitone containing OH, –CH, –NH2, COOH, –CO, C=C=N, NO, and C=C groups. SEM image indicated long-fiber-bundle and honeycomb-structure parenchyma cell structure found between 1 µm and 2 µm, and XRD peaks exhibited hemicellulose at 2Ɵ=15.01 and cellulose at 2Ɵ=22.03. A. marina exhibits excellent adsorption capacity for MR (73% decolorization at a concentration of 500 ppm occurred in highly acidic conditions (pH = 1) after 75 min of contact time), making it a promising candidate for industrial wastewater treatment. The study emphasizes pseudo-second-order kinetics and the Freundlich adsorption isotherm as the best-fitted model for MR adsorption. Furthermore, the adsorbent demonstrated a commendable removal efficiency for MR dye in actual water samples. The removal efficiency of dye in industrial wastewater, CETP, and Sabarmati river discharge is 67.18%, 82.07%, and 77.55% respectively, with a time duration of 20–120 min. The findings underscore the potential of harnessing natural resources like A. marina for sustainable water management, contributing to the broader goal of achieving zero-waste economies.