Acyl coenzyme A (CoA) synthetase (ACS) enzymes catalyze the activation of free fatty acids (FAs) to CoA esters by a two-step thioesterification reaction. Activated FAs participate in a variety of anabolic and catabolic lipid metabolic pathways, including de novo complex lipid biosynthesis, FA -oxidation, and lipid membrane remodeling. Analysis of the genome sequence of the filamentous fungus Neurospora crassa identified seven putative fatty ACSs (ACS-1 through ACS-7). ACS-3 was found to be the major activator for exogenous FAs for anabolic lipid metabolic pathways, and consistent with this finding, ACS-3 localized to the endoplasmic reticulum, plasma membrane, and septa. Double-mutant analyses confirmed partial functional redundancy of ACS-2 and ACS-3. ACS-5 was determined to function in siderophore biosynthesis, indicating alternative functions for ACS enzymes in addition to fatty acid metabolism. The N. crassa ACSs involved in activation of FAs for catabolism were not specifically defined, presumably due to functional redundancy of several of ACSs for catabolism of exogenous FAs.
Lipids are essential components of all living cells. They are major components of biological membranes (e.g., phospholipids) and serve as energy reserves (e.g., triacylglycerols) as well as signaling molecules (e.g., sphingolipids and lysophosphatidic acid). In fungi, fatty acids (FAs) are synthesized de novo via the FA synthase complex (FAS type I) present in the cytosol (1) or in the mitochondria via a suite of enzymes, including an acyl carrier protein. These mitochondrial FAS type II enzymes are not present in a complex (2). Many fungi can also utilize exogenous FAs, both for incorporation into lipids and as a carbon source. In addition to incorporation into complex lipids in the endoplasmic reticulum (ER) (3, 4) and mitochondria (5), FAs can be remodeled by desaturation and elongation (6-8) and degraded for energy production in the peroxisome (glyoxysome) (9, 10) and in the mitochondria (9, 11).One of the most important catalytic activities in lipid metabolism is activation of FAs by acyl coenzyme A (CoA) synthetase (ACS) (EC 6.2.1.3). Activated FAs participate in a number of cellular metabolic pathways, including synthesis of phospholipids, triacylglycerols, and cholesterol esters, FA elongation, FA desaturation, and -oxidation. ACSs catalyze the two-step ATP-dependent reaction of FA activation, whereby first the FA substrate is adenylated to form an acyl-AMP intermediate and subsequently AMP is exchanged with CoA, forming a thioester bond to yield the activated acyl-CoA (12).The number of carbons present in the FA substrate of ACSs ranges from 2 to more than 26. The characteristic length of the FA substrate defines subfamilies of ACSs as short-chain (SC; 2 to 4 carbons), medium-chain (MC; 4 to 12 carbons), long-chain (LC; 12 to 20 carbons), very-long-chain (VLC; 18 to 26 carbons), and "bubblegum" (14 to 24 carbons) FA activators (13). All ACSs contain a highly conserved ATP/AMP binding motif (14), which is conserved among all...