Search citation statements
Paper Sections
Citation Types
Year Published
Publication Types
Relationship
Authors
Journals
In plants, the BAX inhibitor-1 ( BI-1 ) gene plays a crucial part in controlling cell death under stress conditions. This mechanism of Programmed Cell Death (PCD) is genetically regulated and is crucial for the elimination of unwanted or damaged cells in a controlled manner, which is essential for normal development and tissue maintenance. A study on cucumber identified and characterized five BI-1 genes: CsBI1 , CsBI2 , CsBI3 , CsBI4 , and CsBI5 . These genes share conserved domains, indicating common evolutionary history and function. Physicochemical analysis revealed their molecular weights and isoelectric points, while subcellular localization showed their presence in different cellular compartments. The phylogenetic analysis highlighted evolutionary relationships with related crops. Chromosomal distribution and synteny analysis suggested segmental or tandem duplications within the gene family. Protein-protein interaction analysis revealed extensive interactions with other cucumber proteins. Cis-regulatory elements in the promoter regions provided insights into potential functions and transcriptional regulation. miRNAs showed diverse regulatory mechanisms, including mRNA cleavage and translational inhibition. The CsBI3 , CsBI4 and CsBI5 genes exhibit elevated expression levels during cold stress, suggesting their vital involvement in cucumber plant defense mechanisms. The application of chitosan oligosaccharides externally confirms their distinct expression patterns. The qRT-PCR confirms the upregulation of CsBI genes in ToLCNDV-infected plants, indicating their potential to mitigate biotic and abiotic stresses. The comprehensive genome-wide exploration provides opportunities for the development of cold-tolerant and virus-resistant cucumber variants by traditional breeding or gene. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-024-10704-5.
In plants, the BAX inhibitor-1 ( BI-1 ) gene plays a crucial part in controlling cell death under stress conditions. This mechanism of Programmed Cell Death (PCD) is genetically regulated and is crucial for the elimination of unwanted or damaged cells in a controlled manner, which is essential for normal development and tissue maintenance. A study on cucumber identified and characterized five BI-1 genes: CsBI1 , CsBI2 , CsBI3 , CsBI4 , and CsBI5 . These genes share conserved domains, indicating common evolutionary history and function. Physicochemical analysis revealed their molecular weights and isoelectric points, while subcellular localization showed their presence in different cellular compartments. The phylogenetic analysis highlighted evolutionary relationships with related crops. Chromosomal distribution and synteny analysis suggested segmental or tandem duplications within the gene family. Protein-protein interaction analysis revealed extensive interactions with other cucumber proteins. Cis-regulatory elements in the promoter regions provided insights into potential functions and transcriptional regulation. miRNAs showed diverse regulatory mechanisms, including mRNA cleavage and translational inhibition. The CsBI3 , CsBI4 and CsBI5 genes exhibit elevated expression levels during cold stress, suggesting their vital involvement in cucumber plant defense mechanisms. The application of chitosan oligosaccharides externally confirms their distinct expression patterns. The qRT-PCR confirms the upregulation of CsBI genes in ToLCNDV-infected plants, indicating their potential to mitigate biotic and abiotic stresses. The comprehensive genome-wide exploration provides opportunities for the development of cold-tolerant and virus-resistant cucumber variants by traditional breeding or gene. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-024-10704-5.
In the context of anthropogenic evolution, various sectors have been exploited to satisfy human needs and demands, often pushing them to the brink of deterioration and destruction. One such sector is agrochemicals, which have been increasingly employed to achieve higher yields and bridge the gap between food supply and demand. However, extensive and prolonged use of chemical fertilizers most often degrades soil structure over time, resulting in reduced yields and consequently further exacerbating the disparity between supply and demand. To address these challenges and ensure sustainable agricultural production, utilization of microorganisms offers promising solutions. Hence, microorganisms, particularly effective microorganisms (EMs) and plant growth-promoting microbes (PGPMs), are pivotal in agricultural biomes. They enhance crop yields through active contribution to crucial biological processes like nitrogen fixation and phytohormone synthesis, making vital nutrients soluble and acting as natural enemies against pests and pathogens. Microbes directly enhance soil vigor and stimulate plant growth via the exudation of bioactive compounds. The utilization of EMs and PGPMs reduces the need for chemical inputs, leading to lower costs and reduced environmental pollutants. Furthermore, beneficial soil microflora produces growth-related metabolites and phytohormones that augment plant growth and support stress resilience. Microbes also help plants tolerate various abiotic stresses, including metal stress, salt stress, and drought stress, through various mechanisms. Understanding the interactions and activities of microorganisms provides valuable insights into their potential use to manage stress in plants. Thus, by leveraging the full potential of microorganisms, we can develop healthier agroecosystems that contribute sustainably to meet the growing global food demands.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
customersupport@researchsolutions.com
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.