Abstract. The Arctic Ocean is currently undergoing significant transformations due to climate change, leading to profound changes in its microbial plankton communities, including photoautotrophic prokaryotes and eukaryotes (i.e. phytoplankton), as well as hetero-, phago-, and mixotrophic protistan species. Among these unicellular organisms, species of potentially toxic and/or harmful algae (hereafter referred to as HA) are of particular concern, as they pose a threat to human and ecosystem health if they potentially spread into Arctic waters. Despite their importance, the spatiotemporal distribution of these communities in the North American Arctic is poorly understood. To address this gap, we compiled and synthesized a large dataset from various sources, partitioned into nine regions based on the Large Marine Ecosystem classification. Our dataset contains 385 348 georeferenced data points and 18 268 unique sampling events (https://doi.org/10.5281/zenodo.10498858, Schiffrine et al., 2024), encompassing 1442 unique taxa, with Heterokontophyta (notably diatoms) and Dinoflagellata being the most dominant phyla. Our results indicate distinct spatial patterns of diversity, with the highest diversity observed in Atlantic-influenced regions of the North American Arctic. An analysis of the maximum latitude of HA species over time shows a gradual increase, with a notable rise towards the 1990s. However, this trend is likely influenced by increased research at higher latitudes, meaning no substantial spread of HA species into the North American part of the Arctic. Our study underscores the importance of extensive and long-term sampling efforts to understand the Arctic's biodiversity, particularly with respect to documenting the presence and distribution of HA species. While the occurrence of HA species in the Arctic is recognized, our findings highlight the need for further detailed investigations to fully grasp their ecological impacts and variability in the region. Overall, our results provide new insights into the spatial patterns and biodiversity of the microbial plankton communities in the North American Arctic and have implications for understanding the ecological functioning and response of this region to ongoing climate change.