The Voisey’s Bay nickel-copper-cobalt (Ni-Cu-Co) sulphide deposits constitute a significant resource of orthomagmatic mineralization. The deposits are not exposed at the surface except for in a small ferruginous gossan (Discovery Hill). The subsequent geophysical surveys and diamond drilling led to the discovery of the Ovoid ore body, buried beneath 20 m of till, and other deeper deposits in the bedrock. This study was initiated to characterize the sulphide mineralogy of these deposits through various stages of weathering, erosion, and transport. Because the samples ranged from bedrock through to a variety of surficial sediment types, the automated SEM-based identification provided by the MLA-SEM system was the ideal technique to quantitatively evaluate mineral distributions in the different media. The derived MLA-SEM data indicate that, aside from the Discovery Hill gossan, the surface sulphide mineralization at Voisey’s Bay was weathered in a pre-glaciation regolith at the Mini-Ovoid deposit and, on the surface of the Ovoid deposit, the massive sulphide was unoxidized due to a thin calcite-cemented clay cover. Pentlandite is very preferentially oxidized compared to other sulphides in the Voisey’s Bay ore, to depths of up to 10 m in bedrock. Conversely, within the coarse reject samples of crushed drill cores stored in sealed plastic bags, pyrrhotite was altered, whereas pentlandite and chalcopyrite are stable, presumably due to anaerobic reactions. The MLA-SEM detected trace amounts of minute sulphide grains in surficial sediments, but their contents abruptly decreased with distance from the sulphide mineralization. Microtextures such as troilite and pentlandite exsolution or twinning in pyrrhotite, however, could be observed in the fine sulphide grains from till, suggesting a derivation from orthomagmatic sulphide material, such as the Voisey’s Bay mineralization.