Mitochondrial data support an odd-nosed colobine clade

Sterner, Kirstin N.; Raaum, Ryan L.; Zhang, Ya Ping; Stewart, Caro Beth; Disotell, Todd R.

doi:10.1016/j.ympev.2006.01.017

Cited by 96 publications

(123 citation statements)

References 28 publications

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“…In earlier analyses of morphological and molecular data, all supported that the African colobine forms a monophyletic clade [1,12,19], grouping Piliocolobus, Procolobus, and Colobus together [17][18][19][24][25][26]29,30] (Figure 3). Interestingly, a recent phylogenetic analyses of 83 mobile elements from Roos et al [19] indicated a closer association of the Procolobus/Piliocolobus clade to Asian colobines than to Colobus, a relationship that was not rejected by nuclear sequence data in their study, leading them to propose African colobines paraphyly hypothesis ( Figure 3(e)).…”

Section: Phylogeny Of African Colobinaementioning

confidence: 87%

“…Colobus diverged first, and followed by the progenitor of Piliocolobus and Procolobus [17,19,[24][25][26]. Based on both morphology and genetics evidence, it was well-recognized that Procolobus was the sister-taxon of (and possibly congeneric to) Piliocolobus [12,19,24,[26][27][28].…”

Section: Phylogeny Of African Colobinaementioning

confidence: 99%

“…In comparison, Figure 3 Hypotheses of phylogenetic relationships among Colobine genera. Trees were reconstructed based on (a) 12 protein-coding mt genes (10 kb) [17]; (b) fragment of X-chromosome (4.3 kb) [26] and 54 nuclear genes (35 kb) [18]; (c) complete cytb gene (1.8 kb) [30] and 7 mt genes (6.1 kb) [29]; (d) 15 mt genes and 43 nuclear genes (42 kb) [25], 44 nuclear non-coding genes (23 kb) [31]; (e) 83 mobile elements [19]; (f) nuclear genes (13 kb) [19]; (g) complete mt genomes (16.5 kb) [31].…”

Section: Phylogeny Of Asian Presbytinamentioning

confidence: 99%

“…Understanding the true evolutionary history of the colobine monkeys, therefore, becomes an important field and has received special attention. However, due to the fact that nearly all the extant colobine genera diversify from one another within a four-million-year window [17][18][19], attempts to clarify relationships among these colobine genera have encountered challenges.…”

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confidence: 99%

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Summary of phylogeny in subfamily Colobinae (Primate: Cercopithecidae)

Wang

Zhang

2013

Chin. Sci. Bull.

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The phylogeny of the colobine monkeys has a complex evolutionary history, evolving several distinct radiations and owned a wide range of forest and woodland habits in tropical Africa and in southern and eastern Asia. Understanding the true evolutionary history of the colobine monkeys becomes an important field and has received special attention. In this article, we review phylogeny of Colobinae based on previous fossil, cytological, morphological and molecular evidence and indicate the phylogenetic controversies. This review is expected to guide the future research of Colobinae phylogeny, and also provide theoretic evidence for the conservation of these highly endangered and unique primates. Colobinae, phylogeny, Asian presbytina, African colobinae Citation:Wang X P, Zhang Y P, Yu L. Summary of phylogeny in subfamily Colobinae (Primate: Cercopithecidae).

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Section: Phylogeny Of African Colobinaementioning

confidence: 87%

Section: Phylogeny Of African Colobinaementioning

confidence: 99%

Section: Phylogeny Of Asian Presbytinamentioning

confidence: 99%

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confidence: 99%

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Summary of phylogeny in subfamily Colobinae (Primate: Cercopithecidae)

Wang

Zhang

2013

Chin. Sci. Bull.

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“…The silvered langur group comprises six species including Sundaic silvered langur (T. cristatus), Javan langur (T. auratus), Indochinese silvered langur (T. gemaini), Annamese silvered langur (T. margarita), T. mauritius and Tenasserim silvered langur (T. barbei). The classification of silvered langur group uses external morphologies, biogeographic distribution and mitochondrial DNA analysis (Groves 2005, Sterner et al 2006. Within Indochinese silvered langur was recognized two subspecies: T. g. germaini and T. g. caudalis (Parr 2003, Francis 2001.…”

Section: Discussionmentioning

confidence: 99%

The First Report on Standardized Karyotype and Idiogram of Indochinese Silvered Langur, <i>Trachypithecus germaini germaini</i> (Primates, Colobinae) in Thailand

et al. 2015

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SummaryThe first standardized karyotype and idiogram of Indochinese silvered langur (Trachypithecus germaini germaini) in Thailand was established in the present study. Blood samples were taken from two males and two females then subjected to standard whole blood T-lymphocyte culture. The samples were harvested by colchicine-hypotonic-fixation-air-drying technique and followed by conventional staining, GTG-banding and high-resolution techniques with Giemsa s. The results revealed that its diploid number was 2n=44 and fundamental number (NF) was 88 in both males and females. The autosomes comprise 6 large metacentric, 10 large submetacentric, 2 large acrocentric, 6 medium metacentric, 14 medium submetacentric, 2 small submetacentric, and 2 small acrocentric chromosomes. We found that nucleolar organizer regions (the representative of chromosome marker) are located on the long arms near centromeres of a pair submetacentric autosome 17. The X chromosome was a largest submetacentric chromosome while the Y chromosome was the medium submetacentric chromosome. The GTG-banding and high-resolution techniques demonstrated that the respective numbers of bands and locations in T. germaini germaini were 245 and 301 respectively. Each homologous chromosome pair appears clearly differentiated. The karyotype formula for T. germaini germaini could be deduced as:2n (44)

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Phylogenetic Analysis of Protein Sequence Data Using the Randomized Axelerated Maximum Likelihood (RAXML) Program

Rokas

2011

CP Molecular Biology

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Phylogenetic analysis is the study of evolutionary relationships among molecules, phenotypes, and organisms. In the context of protein sequence data, phylogenetic analysis is one of the cornerstones of comparative sequence analysis and has many applications in the study of protein evolution and function. This unit provides a brief review of the principles of phylogenetic analysis and describes several different standard phylogenetic analyses of protein sequence data using the RAXML (Randomized Axelerated Maximum Likelihood) Program.

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Mitochondrial data support an odd-nosed colobine clade

Cited by 96 publications

References 28 publications

Summary of phylogeny in subfamily Colobinae (Primate: Cercopithecidae)

Summary of phylogeny in subfamily Colobinae (Primate: Cercopithecidae)

The First Report on Standardized Karyotype and Idiogram of Indochinese Silvered Langur, <i>Trachypithecus germaini germaini</i> (Primates, Colobinae) in Thailand

Phylogenetic Analysis of Protein Sequence Data Using the Randomized Axelerated Maximum Likelihood (RAXML) Program

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