Solar power is a popular option for powering Unmanned Aerial Vehicles (UAVs) due to its ability to provide power for long-endurance flight. However, solar-powered UAVs face challenges, including operational reliability problems. To address their operational reliability issues, this paper proposes an automatic solar tracker system and tests two implementation strategies for controlling a tandem-winged and solar-powered UAV, developed by the Faculty of Mechanical and Aerospace Engineering, Institut Teknologi Bandung. Due to its unconventional configuration, a mathematical model for the UAV is developed to evaluate the vehicle’s dynamic characteristics. Based on these, three feedback control systems are designed, i.e., roll attitude control, a heading tracker, and a solar tracker. Two implementation strategies are proposed to combine the control systems, i.e., the mode-switching and the simultaneous tracking strategies. A series of simulations are then conducted to check the vehicle’s overall flight performance, as well as the gathering of solar energy. The mode-switching strategy was able to gather up to 13% more solar energy than the simultaneous strategy, which could only reach slightly above 2%. Mode-switching, however, resulted in a shorter range compared to the latter, due to the time spent in the charging mode, flying in a circular pattern.