Limnological aspects of Amazon floodplain lakes are examined in the context of aquatic conservation.
A prerequisite to detecting and evaluating changes that could threaten the ecological health and organisms in floodplain lakes is understanding variation under present conditions. Based on one of the few studies with regular measurements over 2 years, chlorophyll, total phosphorus, dissolved oxygen, transparency, and total suspended solids in Lake Janauacá indicate that the lake is naturally quite variable with a mesotrophic to eutrophic status.
Direct threats to ecological health of floodplain lakes include mining operations that can increase turbidity and trace metals and reduce nutritional quality of sediments. Mercury contamination and methylation leads to bioaccumulation in aquatic organisms.
Deforestation in uplands increases nitrogen and phosphorus inputs to floodplain lakes and can alter trophic status. Deforestation in floodable forests alters the habitat and food of the fish that inhabit these forests.
Cumulative limnological responses as catchments are altered by urban, agricultural, and industrial developments, and as inundation is altered by changes in climate and construction of dams, have major implications for the ecology of floodplain lakes.
To improve understanding and management of threats to the conservation of aquatic Amazon biota and ecosystems requires considerably expanded and coordinated research and community‐based management that includes the spectrum of floodplain lakes throughout the basin.