Krause KL, Forster HV, Davis SE, Kiner T, Bonis JM, Pan LG, Qian B. Focal acidosis in the pre-Bötzinger complex area of awake goats induces a mild tachypnea. J Appl Physiol 106: 241-250, 2009. First published November 13, 2008 doi:10.1152/japplphysiol.90547.2008There are widespread chemosensitive areas in the brain with varying effects on breathing. In the awake goat, microdialyzing (MD) 50% CO2 at multiple sites within the medullary raphe increases pulmonary ventilation (V I), blood pressure, heart rate, and metabolic rate (V O2) (11), while MD in the rostral and caudal cerebellar fastigial nucleus has a stimulating and depressant effect, respectively, on these variables (17). In the anesthetized cat, the pre-Bötzinger complex (preBötzC), a hypothesized respiratory rhythm generator, increases phrenic nerve activity after an acetazolamide-induced acidosis (31, 32). To gain insight into the effects of focal acidosis (FA) within the preBötzC during physiological conditions, we tested the hypothesis that FA in the preBötzC during wakefulness would stimulate breathing, by increasing respiratory frequency (f). Microtubules were bilaterally implanted into the preBötzC of 10 goats. Unilateral MD of mock cerebral spinal fluid equilibrated with 6.4% CO2 did not affect V I, tidal volume (VT), or f. Unilateral MD of 25 and 50% CO2 significantly increased V I and f by 10% (P Ͻ 0.05, n ϭ 10, 17 trials), but VT was unaffected. Bilateral MD of 6.4, 25, or 50% CO2 did not significantly affect V I, VT, or f (P Ͼ 0.05, n ϭ 6, 6 trials). MD of 80% CO2 caused a 180% increase in f and severe disruptions in airflow (n ϭ 2). MD of any level of CO2 did not result in any significant changes in mean arterial blood pressure, heart rate, or V O2. Thus the data suggest that the preBötzC area is chemosensitive, but the responses to FA at this site are unique compared with other chemosensitive sites.breathing; chemosensitivity CENTRAL RESPIRATORY CO 2 /H ϩ chemoreception has been traditionally attributed to sites at or near the ventrolateral medullary surface (16,24,27). However, studies over the last 15-20 yr indicate that the ventrolateral medullary surface is not the sole CO 2 /H ϩ -sensitive area (1-3, 5, 15, 17, 21, 24, 31, 32). Electrophysiological recordings of in vitro preparations have shown that neurons in the retrotrapezoid nucleus, nucleus of the solitary tract, the medullary raphe nucleus (MRN), locus coeruleus, and the pre-Bötzinger complex (preBötzC) increase discharge frequency when the pH in the bathing solution is reduced (3,5,8,14,22,24). Studies in anesthetized preparations that either created a focal acidosis (FA) or assessed the effects of lesions on the hypercapnic ventilatory response also support the concept of widespread chemosensitivity in the medulla, pons, and cerebellum (11,18,32,33,35,36,37).While the in vivo data, under physiological conditions, suggest that chemoreceptors at multiple sites influence breathing, the observed ventilatory effects are not uniform, and the hyperpnea is small, with FA at a single si...