Background: Aseptic meningitis is the most common viral infection caused by human enteroviruses, but enteroviruses associated with aseptic meningitis in Liaocheng have not been reported yet. The aim of this study was to determine prevalence and genetic characteristics of enteroviruses causing aseptic meningitis in children in Liaocheng. Methods: We reviewed the epidemiological and clinical characteristics of 504 pediatric cases with aseptic meningitis in Liaocheng from 2018 to 2019, and analyzed the phylogeny of the predominant enterovirus (EV) types causing this disease. Results: A total of 107 children were positive for EV by the nested-PCR in cerebrospinal fluid samples. Most of the positive patients were children within 13 years old, had symptoms such as fever, headache and vomiting (P<0.05). The most prevalent seasons of EV-positive cases accurred in summer and autumn. The 107 EV sequences belonged to 8 serotypes, and echovirus types 18, 6 and 11 were the three dominant serotypes in Liaocheng during the 2-year period. Phylogentic analyses demonstrated that E18 and E6 isolates belonged to subgenotype C2, while E11 isolates belonged to subgenotype D5. The VP1 analysis suggested that only one lineage of these three types were co-circulating in Liaocheng region. Conclusions: This study demonstrated the diversified enterovirus genotypes attributing to the large outbreak of aseptic meningitis in Liaocheng. Therefore, the large-scale surveillance is required to the epidemiology of enteroviruses associated with aseptic meningitis, and is important for diagnosis and treatment of aseptic meningitis in Liaocheng.