Yellow plumage is common in chickens, especially in breeds such as the Huiyang Bearded chicken, which is indigenous to China. We evaluated plumage colour distribution in F1, F2, and F3 populations of an Huiyang Bearded chicken × White Leghorn chicken cross, the heredity of the yellow plumage trait was distinguished from that of the gold plumage and other known plumage colours. Microscopic analysis of the feather follicles indicated that pheomelanin particles were formed in yellow but not in white feathers. to screen genes related to formation of the pheomelanin particles, we generated transcriptome data from yellow and white feather follicles from 7-and 11-week-old F3 chickens using RNA-seq. We identified 27 differentially expressed genes (DEGs) when comparing the yellow and white feather follicles. These DEGs were enriched in the Gene Ontology classes 'melanosome' and 'melanosome organization' related to the pigmentation process. Down-regulation of TYRP1, DCT, PMEL, MLANA, and HPGDS, verified using quantitative reverse transcription PCR, may lead to reduced eumelanin and increased pheomelanin synthesis in yellow plumage. owing to the presence of the Dominant white locus, both white and yellow plumage lack eumelanin, and white feathers showed no pigments. our results provide an understanding of yellow plumage formation in chickens. Plumage colour in birds, coat colour in mammals, and skin colour in humans have long been the focus of pigment research. Among these, birds display the most fascinating and complex colouration, which has been shown to be caused by melanin (eumelanin and pheomelanin), carotenoids, porphyrins, polyenes and structural colours 1,2. In general, the formation of different plumage colours in chickens is mainly attributed to variations in the quantity, proportion and location of eumelanin and pheomelanin in the feather 3. Eumelanin makes plumage appear black and dark brown, whereas pheomelanin makes it appear red and yellow 4. Both eumelanin and pheomelanin are indole-polymers with tyrosine as a precursor 5. During eumelanin synthesis, tyrosinase (TYR) catalyses the hydroxylation of tyrosine to 3,4-dihydroxyphenylalanine (dopa) and the oxidation of dopa to dopaquinone, which is then oxidized to form eumelanin; this occurs via the TYR family, involving TYR, tyrosinase-related protein 1 (TYRP1), and dopachrome tautomerase (DCT). Dopaquinone is transformed into 5-S-cysteinyldopa when cysteine or glutathione provides sulfhydryl; it eventually forms pheomelanin 5. In recent decades, with the rapid development of sequencing technology, significant progress has been made in the study of functional genes related to plumage colour in chickens. Various plumage colour causal genes, such as the Dominant white gene (I), recessive white gene (c), Silver gene (S), molted gene (mo) and Sex-linked barring gene (B), have been cloned 6-11. Especially for Dominant white allele (I), a strong dilutor of eumelanin owing to an insertion in the transmembrane region of the premelanosome protein (PMEL), it has no effect...