S U M M A R Y Vascular endothelial cells interact with one another via gap junctions, but information on the precise connexin make-up of endothelial gap junctions in intact arterial tissue is limited. One factor contributing to this lack of information is that standard immunocytochemical methodologies applied to arterial sections do not readily permit unequivocal localization of connexin immunolabeling to endothelium. Here we introduce a method for multiple labeling with specific endothelial cell markers and one or more connexin-specific antibodies which overcomes this limitation. Applying this method to localize connexins 43, 40, and 37 by confocal microscopy, we show that the three connexin types have quite distinctive labeling patterns in different vessels. Whereas endothelial cells of rat aorta and coronary artery characteristically show extensive, prominent connexin40, and heterogeneous scattered connexin37, the former, unlike the latter, also has abundant connexin43. The relative lack of connexin43 in coronary artery endothelium was confirmed in both rat and human using three alternative antibodies. In the aorta, connexins43 and 40 commonly co-localize to the same junctional plaque. Even within a given type of endothelium, zonal variation in connexin expression was apparent. In rat endocardium, a zone just below the mitral valve region is marked by expression of greater quantities of connexin43 than surrounding areas. These results are consistent with the idea that differential expression of connexins may contribute to modulation of endothelial gap junction function in different segments and subzones of the arterial system. ( J Histochem Cytochem 45:539-550, 1997)The vascular endothelium forms a continuous monolayer lining the luminal surface of the entire cardiovascular system, providing the structural and metabolic interface between the blood and underlying tissues. Endothelial integrity is essential for maintenance of healthy tissue function, and perturbations of endothelial structure and function are critical to the pathogenesis of vascular disease (Ross 1995;Stary et al. 1994). Integration of endothelial cell functions is mediated by a variety of intercellular signaling mechanisms, including direct cell-to-cell communication via gap junctions (Larson 1988). Gap junctions are specialized cell membrane domains consisting of clusters of protein channels that link the cytoplasmic compartments of neighboring cells, forming pathways for direct exchange of ions and small molecules (for reviews see Yamasaki and