Mevalonate kinase serine/threonine residues have been implicated in substrate binding and inherited metabolic disease. Alignment of >20 mevalonate kinase sequences indicates that Ser-145, Ser-146, Ser-201, and Thr-243 are the only invariant residues with alcohol side chains. These residues have been individually mutated to alanine. Structural integrity of the mutants has been demonstrated by binding studies using fluorescent and spin-labeled ATP analogs. Kinetic characterization of the mutants indicates only modest changes in K m(ATP) . K m for mevalonate increases by Ϸ20-fold for S146A, Ϸ40-fold for T243A, and 100-fold for S201A. V max changes for S145A, S201A, and T243A are <3-fold. Thus, the 65-fold activity decrease associated with the inherited human T243I mutation seems attributable to the nonconservative substitution rather than any critical catalytic function. V max for S146A is diminished by 4000-fold. In terms of V/K MVA , this substitution produces a 10 5 -fold effect, suggesting an active site location and catalytic role for Ser-146. The large k cat effect suggests that Ser-146 productively orients ATP during catalysis. K D(Mg-ATP) increases by almost 40-fold for S146A, indicating a specific role for Ser-146 in liganding Mg 2؉ -ATP. Instead of mapping within a proposed C-terminal ATP binding motif, Ser-146 is situated in a centrally located motif, which characterizes the galactokinase/homoserine kinase/ mevalonate kinase/phosphomevalonate kinase protein family. These observations represent the first functional demonstration that this region is part of the active site in these related phosphotransferases.Isoprenoid biosynthesis is accomplished by diverse pathways that use either acetyl-CoA (1) or glyceraldehyde 3-phosphate and pyruvate (2) as starting materials. Mevalonate kinase (E.C. 2.7.1.36) represents a distinctive component of the former pathway, which functions in eukaryotes, archaebacteria, and some eubacteria. In the mevalonate-mediated pathway for isoprenoid production, attention has long been focused on HMGCoA 1 reductase, which catalyzes a highly regulated step. The diversity of species in which mevalonate kinase functions is reflected in the high degree of heterology that is apparent upon comparison of deduced sequences for this enzyme. Only 5% of the amino acids that encode the human enzyme are invariant. Included in this select group are the residues (Lys-13, 2 Glu-193, Asp-204) that our laboratory has implicated previously (6, 7) in various active site functions. Inspection of mevalonate kinase's amino acid sequence does not suggest that substrate ATP binding relies on well established consensus sequences such as Walker A or Walker B motifs. However, two distinct glycine-rich stretches of amino acid sequence have been proposed as potential ATP-binding regions (8, 9), although no direct evidence that tests these hypotheses or discriminates between the two candidate sequences has appeared.For phosphotransferase enzymes, there are numerous examples of serines or threonines that map to the...