Brine shrimp (
Artemia
) are the only animals to thrive at sodium concentrations above 4 M. Salt excretion is powered by the Na
+
,K
+
-ATPase (NKA), a heterodimeric (αβ) pump that usually exports 3Na
+
in exchange for 2 K
+
per hydrolyzed ATP.
Artemia
express several NKA catalytic α-subunit subtypes. High-salinity adaptation increases abundance of α2
KK
, an isoform that contains two lysines (Lys308 and Lys758 in transmembrane segments TM4 and TM5, respectively) at positions where canonical NKAs have asparagines (
Xenopus
α1’s Asn333 and Asn785). Using de novo transcriptome assembly and qPCR, we found that
Artemia
express two salinity-independent canonical α subunits (α1
NN
and α3
NN
), as well as two β variants, in addition to the salinity-controlled α2
KK
. These β subunits permitted heterologous expression of the α2
KK
pump and determination of its CryoEM structure in a closed, ion-free conformation, showing Lys758 residing within the ion-binding cavity. We used electrophysiology to characterize the function of α2
KK
pumps and compared it to that of
Xenopus
α1 (and its α2
KK
-mimicking single- and double-lysine substitutions). The double substitution N333K/N785K confers α2
KK
-like characteristics to
Xenopus
α1, and mutant cycle analysis reveals energetic coupling between these two residues, illustrating how α2
KK
’s Lys308 helps to maintain high affinity for external K
+
when Lys758 occupies an ion-binding site. By measuring uptake under voltage clamp of the K
+
-congener
86
Rb
+
, we prove that double-lysine-substituted pumps transport 2Na
+
and 1 K
+
per catalytic cycle. Our results show how the two lysines contribute to generate a pump with reduced stoichiometry allowing
Artemia
to maintain steeper Na
+
gradients in hypersaline environments.