The rise in antibiotic-resistant bacteria and contamination of water bodies is a serious issue that demands immense attention of scientific acumen. Here, we examined the pervasiveness of ESBL producing bacteria in Dal Lake and Wular Lake of Kashmir valley, India. Isolates were screened for antibiotic, heavy metal resistant elements, and their coexistence with mobile genetic elements. Out of two hundred one isolates screened, thirty-eight were found positive for ESBL production. Antibiotic profiling of ESBL positive isolates with 16 different drugs representing β-lactam or -non-β-lactam, exhibited multidrug resistance phenotype among 55% isolates. Molecular characterization revealed the occurrence of drug resistance determinants
blaTEM, AmpC, qnrS,
and heavy metal resistance genes (MRGs)
merB
,
merP, merT, silE, silP, silS,
and
arsC
. Furthermore, mobile genetic elements
IntI, SulI, ISecp1, TN3, TN21
were also detected. Conjugation assay confirmed the transfer of different ARGs, HMRGs, and mobile elements in recipient
Escherichia coli
J53 AZ
R
strain. Plasmid incompatibility studies showed
blaTEM
to be associated with Inc groups B/O, HI1, HI2, I1, N, FIA, and FIB. Co-occurrence of
bla
TEM, HMRGs, and mobile elements from the aquatic milieu of Kashmir, India has not been reported so far. From this study, the detection of the
bla
TEM gene in the bacteria
Bacillus simplex
and
Brevibacterium frigoritolerans
are found for the first time. Considering all the facts it becomes crucial to conduct studies in natural aquatic environments that could help depict the epidemiological situations in which the resistance mechanism might have clinical relevance.