Molecular phylogenetic analysis of<i>Tulipa</i>(Liliaceae) based on noncoding plastid and nuclear DNA sequences with an emphasis on Turkey

Türktaş, Mine; Metin, Özge Karakaş; Baştuğ, Berk; Ertuğrul, Fahriye; Saraç, Yasemin Izgi; Kaya, Erdal

doi:10.1111/boj.12040

Cited by 29 publications

(23 citation statements)

References 45 publications

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“…Monophyly of Tulipa , excluding Amana , was well supported and agrees with previous analyses of the genus (Fay et al ., ; Türktaş et al ., ). Amana , although sharing morphological characters with Tulipa and Erythronium , appears to be sister to (or possibly embedded in) Erythronium (Clennett et al ., ).…”

Section: Discussionmentioning

confidence: 97%

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Tiptoe through the tulips - cultural history, molecular phylogenetics and classification ofTulipa(Liliaceae)

et al. 2013

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Tulipa (tulips; Liliaceae) is a genus of geophytes comprising c. 76 species, occurring from southwestern Europe and North Africa to Central Asia. The taxonomy and classification of the genus have been contentious in the past. We investigated the phylogenetic relationships in the genus using DNA sequences from five plastid regions (trnL intron and trnL–trnF spacer, rpl16 intron, rps12–rpl20 intergenic spacer and matK) and the internal transcribed spacer (ITS) region of nuclear ribosomal DNA. Amana and Erythronium were used as outgroups. Sequences were obtained from 25 Tulipa taxa representing all major lineages previously identified as distinct and four outgroups (two Amana spp. and two Erythronium spp.). In the combined maximum parsimony analysis, Tulipa was strongly supported as monophyletic and four clearly defined clades in the genus were obtained, although the relationships between them were unclear. In support of previous molecular studies, the results suggest that section Clusianae should be excluded from subgenus Tulipa and accepted at subgeneric rank. Subgenus Eriostemones and subgenus Tulipa (excluding Clusianae) were both strongly supported. Tulipa sprengeri, traditionally placed in subgenus Tulipa, was shown to be a member of Eriostemones. Orithyia, in this study represented by T. uniflora, formed a fourth lineage, also to be treated at subgeneric level. In the Bayesian analysis, the genus Tulipa was strongly supported and the same four lineages (subgenera) were identified. In this case, Orithyia was sister to the rest of the genus (with moderate support) and subgenera Clusianae and Eriostemones together formed a clade with strong support. Original species descriptions and type specimens of as many names as possible were reviewed and, on this basis, a revised checklist with full synonymy, typification and distribution is provided. The status of T. ×gesneriana and its synonyms is discussed. All accepted species are classified into the four subgenera supported by our phylogenetic study. © 2013 The Linnean Society of London, Botanical Journal of the Linnean Society, 2013, 172, 280–328.

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Section: Discussionmentioning

confidence: 97%

“…Türktaş et al . () presented a molecular phylogenetic study based on species from Turkey, but their study lacked some critical taxa needed to address the remaining questions.…”

Section: Taxonomic History Of Tulipamentioning

confidence: 99%

Tiptoe through the tulips - cultural history, molecular phylogenetics and classification ofTulipa(Liliaceae)

et al. 2013

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“…The tulip originated in Turkey and was introduced into Western Europe in the mid-16 th century (Garber, 2016). In Turkey, the tulip is an ornamental plant of major economic importance (Turktas et al, 2013).…”

Section: Introductionmentioning

confidence: 99%

The occurrence of the Tulip breaking virus in tulips in the northern part of Turkey

Deligöz

Şevi̇k

2019

Folia Horticulturae

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The tulip (Tulipa sp.) is one of the most important ornamental bulbous plants, which has been cultivated as a cut-flower, potted, and garden plant, and used for landscaping in Turkey. This study investigated the occurrence of a viral disease in the tulip cultivars Strong Gold, Pretty Woman and Purple Prince that causes striping of the leaves, flames of different colours on the petals and mosaic patterns on the leaves, in Samsun province of Turkey. Surveys of virus-infected tulip plants were carried out in the Middle Black Sea Region of Turkey in 2015-2016. A total of 212 samples were collected from four locations and checked by biological, serological and molecular methods for the presence of the Tulip breaking virus (TBV). TBV was detected in the leaves and flowers by double-antibody sandwich enzyme-linked immunosorbent assays (DAS-ELISA) in the tulip cultivars (15.5%) tested from Samsun province. TBV infection was found at the highest rate in the cultivar Strong Gold (19.7%), followed by Pretty Woman (14.1%) and Purple Prince (12.8%). The presence of TBV in samples was further confirmed by reverse transcription polymerase chain reaction (RT-PCR) assays. This is the first report on TBV naturally infecting tulips in Samsun province, Turkey.

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“…() and Turktas et al . () published phylogenetic analyses of Tulipa L., the former including a taxonomic treatment of the whole genus and the latter focusing on Turkish species, and Qi et al . () demonstrated that Heterosmilax Kunth is embedded in Smilax L. (Smilacaceae).…”

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confidence: 99%

Another good year for monocot research

Fay

2014

Bot J Linn Soc

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Molecular phylogenetic analysis ofTulipa(Liliaceae) based on noncoding plastid and nuclear DNA sequences with an emphasis on Turkey

Cited by 29 publications

References 45 publications

Tiptoe through the tulips - cultural history, molecular phylogenetics and classification ofTulipa(Liliaceae)

Tiptoe through the tulips - cultural history, molecular phylogenetics and classification ofTulipa(Liliaceae)

The occurrence of the Tulip breaking virus in tulips in the northern part of Turkey

Another good year for monocot research

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