Nucleic acid-based electrochemical sensors (NBEs) can
support continuous
and highly selective molecular monitoring in biological fluids, both
in vitro and in vivo, via affinity-based interactions. Such interactions
afford a sensing versatility that is not supported by strategies that
depend on target-specific reactivity. Thus, NBEs have significantly
expanded the scope of molecules that can be monitored continuously
in biological systems. However, the technology is limited by the lability
of the thiol-based monolayers employed for sensor fabrication. Seeking
to understand the main drivers of monolayer degradation, we studied
four possible mechanisms of NBE decay: (i) passive desorption of monolayer
elements in undisturbed sensors, (ii) voltage-induced desorption under
continuous voltammetric interrogation, (iii) competitive displacement
by thiolated molecules naturally present in biofluids like serum,
and (iv) protein binding. Our results indicate that voltage-induced
desorption of monolayer elements is the main mechanism by which NBEs
decay in phosphate-buffered saline. This degradation can be overcome
by using a voltage window contained between −0.2 and 0.2 V
vs Ag|AgCl, reported for the first time in this work, where electrochemical
oxygen reduction and surface gold oxidation cannot occur. This result
underscores the need for chemically stable redox reporters with more
positive reduction potentials than the benchmark methylene blue and
the ability to cycle thousands of times between redox states to support
continuous sensing for long periods. Additionally, in biofluids, the
rate of sensor decay is further accelerated by the presence of thiolated
small molecules like cysteine and glutathione, which can competitively
displace monolayer elements even in the absence of voltage-induced
damage. We hope that this work will serve as a framework to inspire
future development of novel sensor interfaces aiming to eliminate
the mechanisms of signal decay in NBEs.