2022
DOI: 10.3897/mbmg.6.79471
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Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcoding

Abstract: During the recent decade, high-throughput sequencing (HTS) techniques, in particular, DNA metabarcoding, have facilitated increased detection of biodiversity, including harmful algal bloom (HAB) species. In this study, the presence of HAB species and their appearance patterns were investigated by employing molecular and light microscopy-based monitoring in Tokyo Bay, Japan. The potential co-appearance patterns between the HAB species, as well as with other eukaryotes and prokaryotes were investigated using cor… Show more

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Cited by 5 publications
(9 citation statements)
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“…At the same time, we acknowledge that the number of OTUs is not directly comparable among different studies. On the other hand, the taxa associated with the highest number of OTUs is similar between this and other studies (De Vargas et al, 2015; Sildever et al, 2021, 2022) with the most species‐rich groups being Alveolata (especially dinoflagellates), Opisthokonta (metazoa and fungi), Stramenopiles (especially diatoms), and Rhizaria. In fungi, most of the OTUs were linked with Ascomycota and Basidiomycota as also reported for other marine environments around the world (Tisthammer et al, 2016; Zhang, Pavlovska et al, 2020b).…”
Section: Discussionsupporting
confidence: 90%
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“…At the same time, we acknowledge that the number of OTUs is not directly comparable among different studies. On the other hand, the taxa associated with the highest number of OTUs is similar between this and other studies (De Vargas et al, 2015; Sildever et al, 2021, 2022) with the most species‐rich groups being Alveolata (especially dinoflagellates), Opisthokonta (metazoa and fungi), Stramenopiles (especially diatoms), and Rhizaria. In fungi, most of the OTUs were linked with Ascomycota and Basidiomycota as also reported for other marine environments around the world (Tisthammer et al, 2016; Zhang, Pavlovska et al, 2020b).…”
Section: Discussionsupporting
confidence: 90%
“…The high‐resolution dataset also facilitated the detection of statistically significant associations between different OTUs. Similar approaches have been used for investigating potential interactions across several trophic levels in the marine community (Djurhuus et al, 2020; Zhang, Pavlovska et al, 2020b) as well as between harmful algal species and bacteria (Sildever et al, 2022). The majority of the OTUs that were associated with a single species at ≥99% similarity based on 18S universal primer had more than one significant association with another OTU.…”
Section: Discussionmentioning
confidence: 99%
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