The effects of road traffic mortality on amphibian populations are in many cases hard to estimate and speculate, primarily due to the inaccuracy of the methods employed in studies. We have analyzed amphibian road mortality during two breeding seasons on selected road sections adjoining spawning ponds and have critically reviewed methods used for estimating the impact of road traffic on migrating amphibians. The mortality rates of particular amphibian species differed significantly and varied according to year, site, and traffic volume. The highest mortality was recorded for Bufo bufo and the lowest for Lissotriton vulgaris. Species-specific parameter estimates of mortality, evaluated on a daily basis counts of roadkills, were positively correlated with the mean body mass of the amphibian species. The share of a given species among carcasses found on the road, commonly used in such studies, proved to be an unreliable measure of mortality. We found that nearly 60% of amphibian roadkill victims had disappeared within 24 h of exposure, and the number of missing carcasses was inversely related to body mass.