Megakaryocytes were isolated quantitatively from rat bone marrow by centrifugal elutriation (CE). CE-enriched megakaryocytes were stained supravitally for either (1) DNA content with Hoechst 33342, (2) surface membrane immunofluorescence with fluorescein isothiocyanate (FITC)-conjugated antiplatelet antibody, or (3) both. The cells were then measured using a Becton Dickinson FACS IV flow cytometer. The following correlations were analyzed: (1) DNA content and light scatter, (2) light scatter and antiplatelet immunofluorescence, and (3) DNA content and antiplatelet immunofluorescence. Although the range of light scatter increased as a function of DNA content, discrete subpopulations of megakaryocytes with different light scatter properties were detected within each of the three principal ploidy classes (SC, 16C, and 32C). Other discrete megakaryocyte subpopulations were revealed in the analysis of antiplatelet surface immunofluorescence as a function of degree of light scatter. The nonMegakaryocytes constitute a unique system of hematopoietic cell differentiation characterized by high nuclear ploidy and development of a cytoplasmic mass that at end-stage differentiation disintegrates into anucleate blood platelets. The two most striking morphological features of megakaryocytes, size and nuclear structure, have served as qualitative indices of megakaryocyte differentiation. Light microscopy and tinctorial techniques have been used previously to identify megakaryocytes and classify them into maturation stages on a qualitative basis; with both these techniques DNA content is measured and correlated to presumptive levels of differentiation terminating in cytoplasmic platelet formation (12-14,17). However, our understanding of this unique cell line remains limited by the lack of an objective, quantitative approach that is based on large numbers of these rare cells and that is applied at the single-cell level to define characteristics of megakaryocytes for correlation with degrees of differentiation.Megakaryocytes are difficult cells to study, partly be- (20) that megakaryocytes are able to synthesize thromboxane B2, which is also a component of a major metabolic pathway in platelet hemostatic function, has provided evidence that the thromboxane pathway may serve as a marker of differentiation in these cells (21). Thus, both shared metabolic and antigenic characteristics should be of potential use in studying megakaryocyte differentiation.The application of laser-based flow cytometry to the analysis of megakaryocytes is an exciting new approach, since the ability to perform correlated, multiparameter analyses on large numbers of these cells (measured at rates in excess of 6 x lo4 celldmin) is well suited to the type of multivectorial analysis inherent in models of megakaryocyte differentiation that have been proposed (10,161. Flow cytometry has been applied successfully to the analysis of the DNA content of rodent (9) as well as guinea pig and monkey megakaryocytes (5) using both unfractionated marrow and fractions en...