Multi-time-point analysis: A time course analysis with functional near-infrared spectroscopy

Abstract

In the data analysis of functional near-infrared spectroscopy (fNIRS), linear model frameworks, in particular mass univariate analysis, are often used when researchers consider examining the difference between conditions at each sampled time point. However, some statistical issues, such as assumptions of linearity, autocorrelation and multiple comparison problems, influence statistical inferences when mass univariate analysis is used on fNIRS time course data. In order to address these issues, the present study proposes a novel perspective, multi-time-point analysis (MTPA), to discriminate signal differences between conditions by combining temporal information from multiple time points in fNIRS. In addition, MTPA adopts the random forest algorithm from the statistical learning domain, followed by a series of cross-validation procedures, providing reasonable power for detecting significant time points and ensuring generalizability. Using a real fNIRS data set, the proposed MTPA outperformed mass univariate analysis in detecting more time points, showing significant differences between experimental conditions. Finally, MTPA was also able to make comparisons between different areas, leading to a novel viewpoint of fNIRS time course analysis and providing additional theoretical implications for future fNIRS studies. The data set and all source code are available for researchers to replicate the analyses and to adapt the program for their own needs in future fNIRS studies.

OptoNet II: An Advanced MATLAB-Based Toolbox for Functional Cortical Connectivity Analysis With Surrogate Tests Using fNIRS

“…Functional neural connectivity plays an important role in advanced cognitive processes, and has thus drawn increasing attention from researchers over the past decades [1][2][3][4][5][6]. Various measures, such as phase synchronization index (PSI) [7], mutual information [8], partial directed coherence [9], frequency ratio [10], and mean phase coherence [9], have been applied to quantify the functional connectivity of different brain units using multichannel neural signals, including electroencephalography (EEG), functional magnetic resonance imaging (fMRI), and functional nearinfrared spectroscopy (fNIRS) [5].…”