Overexpression of P-glycoprotein is characteristic of multidrug-resistant cells. We analyzed four Pglycoprotein transcripts that are simultaneously expressed in a drug-sensitive Chinese hamster ovary cell line. We concluded that these transcripts are encoded by two distinct members of a P-glycoprotein multigene family, each of which has two alternative polyadenylation sites. A comparison of the two hamster sequences with the single reported human and mouse P-glycoprotein cDNA sequences demonstrates that P-glycoprotein is a highly conserved protein, that the hamster multigene family is undergoing concerted evolution, and that differences between gene family members are maintained across species. These conserved differences suggest that there may be functional differences between P-glycoprotein molecules.The presence of multidrug-resistant cells in human tumors and their selection and proliferation during chemotherapy may be major obstacles to cancer treatment (9). Mammalian cell lines selected for resistance to a single cytotoxic agent often develop pleiotropic resistance to unrelated drugs (9). Since many of the drugs involved are commonly used in chemotherapy, such cell lines have proven useful as in vitro models for the study of multidrug resistance in human tumors.A consistent alteration in multidrug-resistant cells is the overexpression of P-glycoprotein, an integral membrane protein of 170 kilodaltons (9). A P-glycoprotein cDNA clone, pCHP1 (19), has been isolated by using a P-glycoproteinspecific monoclonal antibody (14). This clone was used to isolate the cDNA clones discussed in this paper. Independently, an in-gel renaturation technique (20) has also been used to isolate amplified sequences from a drug-resistant hamster cell line (21). These sequences were used to isolate homologous human (2) and mouse (10) cDNA clones. The human cDNA sequence (mdrl) was reconstructed from several overlapping clones isolated from a multidrug-resistant cell line cDNA library. The mouse sequence was determined from a single full-length cDNA clone isolated from a drug-sensitive cell line. The human cDNA sequence (mdrl) encodes a protein detected by P-glycoprotein-specific monoclonal antibodies (26). We show that the human and mouse genes are homologs of different hamster P-glycoprotein (pgp) genes. We refer to the human and mouse mdr sequences as pgp genes in this communication to facilitate comparison of the P-glycoprotein genes across species.P-glycoprotein contains a tandem duplication in structure, with each half consisting of six transmembrane domains and a cytoplasmic domain containing the consensus sequences for an ATP-binding site (Fig.