Pattern formation is a widely observed phenomenon in diverse fields including materials physics, developmental biology, ecology and atmospheric weather, among many others. The physics underlying the patterns is specific to the mechanisms operating in each field, and is encoded by partial differential equations (PDEs). With the aim of discovering hidden physics, we have previously presented a variational approach to identifying such systems of PDEs in the face of noisy data at varying fidelities (Computer Methods in Applied Mechanics and Engineering, 353, 201-216, 2019). Here, we extend our methods to address the challenges presented by image data on microstructures in materials physics. PDEs are formally posed as initial and boundary value problems over combinations of time intervals and spatial domains whose evolution is either fixed or can be tracked. However, the heat treatments necessary to attain the kinetic rates and thermodynamic driving forces that result in significant evolution of microstructure in materials as well as the processing required for the microscopy that follows translate to notably different characteristics in the data so obtained. The vast majority of microscopy techniques for evolving microstructure in a given material system deliver micrographs of pattern evolution wherein the domain at one instant bears no spatial correlation to that at another time. This extends to boundary data, when available. The temporal resolution can rarely capture the fastest time scales that dominate the early dynamics, and noise abounds. Finally data for evolution of the same phenomenon in a material system may well be obtained from different physical samples. Against this backdrop of uncorrelated, sparse and multi-source data, we exploit the variational framework to make judicious choices of moments of fields and identify PDE operators from the dynamics. This step is preceded by an imposition of consistency to parsimoniously infer