-Skeletal muscle undergoes remarkable adaptations in response to chronic decreases in contractile activity, such as a loss of muscle mass, decreases in both mitochondrial content and function, as well as the activation of apoptosis. Although these adaptations are well known, questions remain regarding the signaling pathways that mediated these changes. Autophagy is an organelle turnover pathway that could contribute to these adaptations. The purpose of this study was to determine whether denervation-induced muscle disuse would result in the activation of autophagy gene expression in both wild-type (WT) and Bax/Bak double knockout (DKO) animals, which display an attenuated apoptotic response. Denervation caused a reduction in muscle mass for WT and DKO animals; however, there was a 40% attenuation in muscle atrophy in DKO animals. Mitochondrial state 3 respiration was significantly reduced, and reactive oxygen species production was increased by two-to threefold in both WT and DKO animals. Apoptotic markers, including cytosolic AIF and DNA fragmentation, were elevated in WT, but not in DKO animals following denervation. Autophagy proteins including LC3II, ULK1, ATG7, p62, and Beclin1 were increased similarly following denervation for both WT and DKO. Interestingly, denervation markedly increased the localization of LC3II to subsarcolemmal mitochondria, and this was more pronounced in the DKO animals. Thus denervation-induced muscle disuse activates both apoptotic and autophagic signaling pathways in muscle, and autophagic protein expression does not exhibit a compensatory increase in the presence of attenuated apoptosis. However, the absence of Bax and Bak may represent a potential signal to trigger mitophagy in muscle.reactive oxygen species; muscle atrophy; mitochondria; mitophagy MACROAUTOPHAGY (henceforth referred to as autophagy) is a highly conserved lysosomal-dependent degradation pathway that coordinates and oversees the digestion of organelles, proteins, and intracellular pathogens (4, 34, 42). More than 30 AuTophaGy-related (ATG) regulatory genes products have been identified that are known to facilitate the engulfment of cytoplasmic material into double-membraned vesicles called autophagosomes (4, 42), and to assist in their degradation through fusion with lysosomes (10, 21). As a consequence, autophagy plays a prominent housekeeping role, which maintains homeostasis by selectively eliminating cellular debris. Moreover, although the activity of the autophagic pathway can be increased in response to stress stimuli, the importance of maintaining adequate levels of autophagy for cellular health and function is best demonstrated in several disease conditions, such as Parkinson's and Pompe's disease (27, 41), which are attributable, at least in part, to mutations in either ATG proteins or other autophagy-related genes.Currently there is great interest in determining the meaningful purposes that autophagy has in regulating cellular health, and in more fully understanding the factors that direct selective for...