“…For the last 20 years the clinical diagnosis of FSHD has been supported by this type of D4Z4 DNA testing, which has been considered highly sensitive and specific for disease (Lunt et al , 1995 a , b ; Lunt, 1998; Tawil et al , 2010). However, several studies on FSHD families describe subjects carrying D4Z4 alleles of reduced size (DRA) and no signs of the disease, defined as non-penetrant carriers (Tawil et al , 1996; Zatz et al , 1998; Ricci et al , 1999; van Overveld et al , 2000; Goto et al , 2004; Tonini et al , 2004; Sakellariou et al , 2012; Scionti et al , 2012 a ). As a possible explanation of some non-penetrant cases, it has been proposed that reduction of D4Z4 repeats on chromosome 4q35 is pathogenic only in certain chromosomal backgrounds, defined by ‘permissive’ specific haplotypes, namely (i) reduction of D4Z4 elements; (ii) presence of the 4A(159/161/168) haplotype; and (iii) a single nucleotide polymorphism that provides a polyadenylation signal (PAS) for the DUX4 transcript (Lemmers et al , 2002, 2007, 2010).…”