2012
DOI: 10.1136/jmedgenet-2012-101132
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Mutations inTMEM231cause Joubert syndrome in French Canadians

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Cited by 68 publications
(53 citation statements)
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“…Target enrichment was achieved using the Agilent SureSelect 50 Mb (V3) All Exon Kit and followed by sequencing (Illumina HiSeq), generating 414 Gbp of 100 base pair, paired-end reads per sample. Read alignment, variant calling, and annotation were done as outlined for previous Finding of Rare Disease Genes projects 6 …”
Section: Methodsmentioning
confidence: 99%
“…Target enrichment was achieved using the Agilent SureSelect 50 Mb (V3) All Exon Kit and followed by sequencing (Illumina HiSeq), generating 414 Gbp of 100 base pair, paired-end reads per sample. Read alignment, variant calling, and annotation were done as outlined for previous Finding of Rare Disease Genes projects 6 …”
Section: Methodsmentioning
confidence: 99%
“…1 To date, up to 19 genes have been identified with either autosomal recessive (INPP5E, TMEM216, AHI1, NPHP1, CEP290, TMEM67, RPGRIP1L, ARL13B, CC2D2A, TTC21B, KIF7, TCTN1, TCTN2, TMEM237, CEP41, TMEM138, C5orf42, TMEM231) or X-linked inheritance (OFD1). 2,3 Intriguingly, all JSRD genes code for proteins of the primary cilium, making these disorders part of the expanding group of ciliopathies. 4 There is large clinical and genetic overlap between JSRD and other ciliopathies such as Meckel syndrome (MKS; MIM249000), isolated nephronophthisis (NPH; MIM256100) and Senior-Loken syndrome (MIM266900).…”
Section: Introductionmentioning
confidence: 99%
“…Target enrichment was achieved using the Agilent SureSelect 50 Mb (V3) All Exon Kit and followed by sequencing (Illumina HiSeq 2000), generating >14 Gbp of 100 bp, paired-end reads per sample. Read alignment, variant calling and annotation were done as outlined for previous FORGE projects11 with a pipeline based on BWA (Burrows-Wheeler Aligner), Picard, Annovar, and custom annotation scripts. Variants were compared to those previously seen in the 1000 genomes phase 1 dataset (April 2012 release), the 6500 exomes of the National Heart, Lung, and Blood Institute (NHLBI) GO Exome Sequencing Project (ESP, Seattle, Washington, USA, data downloaded 3 October 2012), as well as in approximately 1000 exomes previously sequenced at the McGill University and Genome Quebec Innovation Centre.…”
mentioning
confidence: 99%