Insulin-degrading enzyme (IDE) plays a principal role in the proteolysis of several peptides in addition to insulin and is encoded by IDE, which resides in a region of chromosome 10q that is linked to type 2 diabetes. Two recent studies presented genetic association data on IDE and type 2 diabetes (one positive and the other negative), but neither explored the fundamental question of whether polymorphism in IDE has a measurable influence on insulin levels in human populations. To address this possibility, 14 single nucleotide polymorphisms (SNPs) from a linkage disequilibrium block encompassing IDE have been genotyped in a sample of 321 impaired glucose tolerant and 403 nondiabetic control subjects. Analyses based on haplotypic genotypes (diplotypes), constructed with SNPs that differentiate common extant haplotypes extending across IDE, provided compelling evidence of association with fasting insulin levels (P ؍ 0.0009), 2-h insulin levels (P ؍ 0.0027), homeostasis model assessment of insulin resistance (P ؍ 0.0001), and BMI (P ؍ 0.0067), with effects exclusively evident in men. The strongest evidence for an effect of a single marker was obtained for rs2251101 (located near the 3 untranslated region of IDE) on 2-h insulin levels (P ؍ 0.000023). Diplotype analyses, however, suggest the presence of multiple interacting traitmodifying sequences in the region. Results indicate that polymorphism in/near IDE contributes to a large proportion of variance in plasma insulin levels and correlated traits, but questions of sex specificity and allelic heterogeneity will need to be taken into consideration as the molecular basis of the observed phenotypic effects unfolds. Diabetes 53:2137-2142, 2004 T he gene encoding insulin-degrading enzyme (IDE) is located on chromosome 10q23-q24, within a region linked to type 2 diabetes and related quantitative traits (1-4). IDE is the major enzyme responsible for insulin proteolysis in vitro (5) and shares structural and functional homology with bacterial protease III, which may function in the termination of the insulin response (6,7). In mice, IDE hypofunction induced by IDE gene disruption leads to hyperinsulinemia (8). Furthermore, IDE activity in the diabetic Goto-Kakizaki (GK) rat is reduced by ϳ30%, where polymorphism in IDE is likely to be the main contributing factor (9). Congruence of positional and functional data indicates that sequence variation in IDE may play a role in modifying insulin metabolism in human populations. Two recent genetic association studies investigated the IDE region in relation to type 2 diabetes. One produced significant evidence for effects on both type 2 diabetes and plasma glucose levels (10), whereas the other explored only case-control models and obtained no evidence of association (11). Neither of these studies, however, attempted to directly relate IDE variants to measures of insulin metabolism.To evaluate the potential influence of genetic variation in IDE on insulin levels and correlated quantitative traits, a haplotype-tagging stra...