“…Hypermutation is a hallmark of antibiotic-resistance acquisition that has been observed in several previous experimental evolution studies [ 56 ]. As a result of hypermutation, each monoculture population acquired hundreds of fixed mutations ( Fig 4D ), including mutations previously shown to confer colistin resistance, in genes such as pmrB [ 57 ], ptsP [ 58 , 59 ], pqsR [ 58 ], colS [ 60 , 61 ], porins [ 58 ], and proteins related to bacterial motility [ 62 ] ( Fig 4E and S3 Table ). In contrast, none of the co-culture-evolved populations became hypermutators; each only harbored 6 to 8 fixed mutations ( Fig 4D ), primarily in other targets for colistin resistance, such as genes in LPS biosynthesis [ 63 ] and an outer-membrane protein oprH [ 52 ] (Figs 4E and S18 and S3 Table ).…”