This study aimed to evaluate the incidence of fungi in kareish cheese and trial to control them. Seventy-five Kareish cheese samples were collected randomly from supermarkets, groceries, small dairies and street-vendors at Gharbia Governorate for mycological examination. In addition, kareish cheese was manufactured in laboratory with addition of natamycin (0.02%, 0.015%), chitosan (1.5%, 1%) and thyme oil (1.5%, 1%). The quality of these cheeses was checked during storage period. The obtained results revealed that all examined samples were contaminated with moulds and yeast with a mean count of 2.3×10 5 ±2.6×10 4 and 1.5x10 6 ± 8.4x10 5 cfu/g, respectively. The profile of the genera of mould isolated were Aspergillus spp 124 (42.8%), Penicillium spp 49 (16.8%) , Phoma sorghina 15 (5%), Mucor 7 (2.4%), Nigrospora oryzae 2 (0.6%), Cladosporium cladosporidies 16 (5.5%), Chaetomium Brasiliense 4 (1.3%) Byssochlamys nivea 3 (1%), Colletotrichum gloeosporioidides 2(0.6%). Geotrichum candidum 70 (24%). The frequency distribution of yeast isolated from the examined kareish cheese samples were Candida 24.8%, Rhodotorulla 15%, Saccharomyces 13.5%, Debromyces hansenii 14.7%, Trichosporon 5.6%, Yarrowia lipolytica16.8%, Cryptococus spp. 2.2% and Torulopsis spp. 5.6%. The results of this study showed that manufactured cheese containing natamycin and chitosan had better properties than cheese containing thyme oil.