“…Examples include Myosin IIIa (Quintero et al, 2010(Quintero et al, , 2013) (a motor protein that binds actin and localises to filopodial tips), Ataxia Telangiectasia Mutated (ATM) Kinase (Bakkenist and Kastan, 2003;Kozlov et al, 2006Kozlov et al, , 2011Goodarzi et al, 2004;Ali et al, 2004) (an enzyme that is activated by DNA double-strand breaks), and p21 Activated Kinase 2 (PAK2) (Benner et al, 1995;Tuazon et al, 1997;Zenke et al, 1999;Wu and Wang, 2003;Jung and Traugh, 2005;Wang and Wang, 2008) (a protein that responds to several stress signals). In order to model any one of these systems explicitly, it may be necessary to incorporate other reactions specific to the system in question.…”