2023
DOI: 10.1261/rna.079505.122
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Nanoblot: an R-package for visualization of RNA isoforms from long-read RNA-sequencing data

Abstract: RT-PCR and northern blots have long been used to study RNA isoforms usage for single genes. Recently, advancements in long read sequencing have yielded unprecedented information about the usage and abundance of these RNA isoforms. However, visualization of long-read sequencing data remains challenging due to the high information density. To alleviate these issues we have developed NanoBlot, an open-source, R-package, which generates northern blot and RT-PCR-like images from long-read sequencing data. NanoBlot … Show more

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Cited by 4 publications
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