2015
DOI: 10.1021/acs.langmuir.5b01866
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Nanodomain Formation of Ganglioside GM1 in Lipid Membrane: Effects of Cholera Toxin-Mediated Cross-Linking

Abstract: Cross-linking of specific lipid components by proteins mediates transmembrane signaling and material transport. In this work, we conducted coarse-grained simulation to investigate the interactions of binding units of chorela toxin (CTB) with mixed ganglioside GM1 and dipalmitoylphosphatidylcholine (DPPC) lipid bilayer membrane. We determine that the binding of CTB pentamers cross-links GM1 molecules into protein-sized nanodomains that have distinct lipid order compared with the bulk. The toxin in the nanodomai… Show more

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Cited by 29 publications
(28 citation statements)
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“…This study will enable one to utilize the current data for designing structural based drug inhibitors of this enzyme. Similarly, this work will further enhance the validity of the previously published experimental models [16,23] that utilized an array of biophysical and physiochemical methods and a variety of experimental conditions. This work will also be a stimulus for the beginning of MD simulation based docking, as the static structures of molecules are relatively less informative as compared to the dynamic structure of the protein -ligand system.…”
Section: Introductionmentioning
confidence: 74%
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“…This study will enable one to utilize the current data for designing structural based drug inhibitors of this enzyme. Similarly, this work will further enhance the validity of the previously published experimental models [16,23] that utilized an array of biophysical and physiochemical methods and a variety of experimental conditions. This work will also be a stimulus for the beginning of MD simulation based docking, as the static structures of molecules are relatively less informative as compared to the dynamic structure of the protein -ligand system.…”
Section: Introductionmentioning
confidence: 74%
“…Currently more than 10 well resolved crystal structures of CT are available [2,11,21,22] and they off er a base for designing potent inhibitors against this toxin through a structure-based approach by using molecular modeling and dynamics simulation [22,23]. The mode of action of CT showed several important steps that can be exploited for drug design [22].…”
Section: Introductionmentioning
confidence: 99%
“…A link between GM1, pinning and interdigitation has recently been found in both simulations and model membrane studies (Spillane et al, 2014; Sun et al, 2015). It seems likely that the lo-domain formation observed in the plasma membrane after cross-linking outer leaflet components, described above, causes the pinned molecules to stretch and hence make contact with the inner leaflet lipids, both nucleating and stabilizing the domains.…”
Section: Pinningmentioning
confidence: 68%
“…In molecular dynamics (MD) simulations of asymmetric bilayers, lo-domains in one leaflet can induce registered ordered domains in an opposing leaflet with a composition that on its own would not allow lo-domain formation (Perlmutter and Sachs, 2011; Polley et al, 2014). MD simulations and theoretical considerations have also suggested the opposite possibility that membrane fluidisation in one leaflet may cause a decrease in the order of or even prevent phase separation in the opposing leaflet (Wagner et al, 2007; Sun et al, 2015). In asymmetric supported bilayers, lo-domains on the supported side can induce lo-domains in the free side with inner leaflet lipid mixes that only form ld-phase on their own (Kiessling et al, 2006), a process that was later shown to require acyl chain diversity among the inner leaflet lipids (Wan et al, 2008).…”
Section: Lipid Asymmetry In the Plasma Membranementioning
confidence: 99%
“…Thus, ceramide structure could impact the raft association of cross-linked GM1, which is credited with the membrane bending and internalization of CTxB in cells (31,(54)(55)(56). Variation in the ceramide tail structure may alter the composition and acyl-tail order of GM1-rich nanoscopic domains (37,57,58). Accordingly, the spontaneous recruitment of liquid-order preferring lipids and the line tension surrounding the GM1-rich domain are likely to depend on the ceramide structure.…”
Section: Discussionmentioning
confidence: 99%