The possibility of crystalline states of interacting electrons, known as Wigner crystals, has been intensively studied in each of the three dimensions. One-dimensional (1D) systems, however, can be interconnected forming two-dimensional (2D) lattices, being a three-terminal Y-junction (Y-J) the simplest one. Then, even when electrons in the individual branches of the Y are confined in 1D, as the Y-J is in 2D, one could expect significant differences in the crystalline state of the electron gas in a Y-J. With the recent report of fabrication of defect-free GaAs/AlGaAs Y-Js by epitaxial methods, the study of semiconductor Y-Js acquires a special relevance due to its eventual direct exploration. Here, by considering the collective electron interactions using a Yukawa-like effective potential, we explore a two-electron distribution in nanowire Y-Js by modulating its electron density via a screening parameter. We find that the electrons changes from a quasi-continuous to a Wigner molecule-like distribution when the electron density decreases in the Y-J. In bold contrast to the strict 1D case, where equidistant distributions of equal density are obtained in the Wigner regime, in the Y-J equidistant distributions of asymmetric density are induced. We also explore the effect of an external electric field acting along the Y-axis on the asymmetric distributions.