2017
DOI: 10.1186/s12931-017-0696-5
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Nasal gene expression differentiates COPD from controls and overlaps bronchial gene expression

Abstract: BackgroundNasal gene expression profiling is a promising method to characterize COPD non-invasively. We aimed to identify a nasal gene expression profile to distinguish COPD patients from healthy controls. We investigated whether this COPD-associated gene expression profile in nasal epithelium is comparable with the profile observed in bronchial epithelium.MethodsGenome wide gene expression analysis was performed on nasal epithelial brushes of 31 severe COPD patients and 22 controls, all current smokers, using… Show more

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Cited by 35 publications
(31 citation statements)
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“…It should be noted that our study relies solely on the use of ex vivo HBE derived from the three subject populations. Although there is ample precedent for ex vivo airway epithelial cells from different subject populations to retain phenotypic differences in culture (48)(49)(50), confirmation that our findings reflect in vivo responses will require additional studies to analyze IL-17C expression from epithelial cells obtained directly from the airways from subject groups during in vivo infections.…”
Section: Discussionmentioning
confidence: 88%
“…It should be noted that our study relies solely on the use of ex vivo HBE derived from the three subject populations. Although there is ample precedent for ex vivo airway epithelial cells from different subject populations to retain phenotypic differences in culture (48)(49)(50), confirmation that our findings reflect in vivo responses will require additional studies to analyze IL-17C expression from epithelial cells obtained directly from the airways from subject groups during in vivo infections.…”
Section: Discussionmentioning
confidence: 88%
“…For this study, patients with persistent asthma were included, based on the presence of bronchial hyper-responsiveness after methacholine challenges, characteristic asthma symptoms and a doctor's diagnosis of asthma 26 . In parallel, sixteen healthy controls were included with no history of respiratory disease, normal spirometry and absence of bronchial hyperresponsiveness (NORM study 27,28 ). The NORM study was also approved by the Medical Ethical Committee of the University Medical Center Groningen and participants gave their informed consent.…”
Section: Patient Selection and Cd4 + T Cell Isolation From Pbmcs Thementioning
confidence: 99%
“…We reasoned that inflammatory cells may provide a target for WNT5A, explaining the changes in Th2 cytokine expression. Therefore, and to provide translational relevance for our findings, CD4 + T cells obtained from healthy controls (taken from the NORM cohort 27,28 ) and asthmatic patients (taken from the ROORDA cohort 25 ) were cultured in the absence and presence of WNT5A and/or anti-CD3/anti-CD28 to activate the cells and subsequently subjected to bulk RNA sequencing. In our initial studies, libraries prepared out www.nature.com/scientificreports www.nature.com/scientificreports/ of CD4 + T cells from the asthma cohort were used for the RNA sequencing analysis.…”
Section: Induced Wnt5a Expression Increases Production Of Th2-cytokinmentioning
confidence: 99%
“…Exposure to cigarette smoke creates a field of injury throughout the entire respiratory tract by inducing a variety gene-expression alterations associated with smoking (8,9); smoking cessation (10); chronic obstructive pulmonary disease (COPD;refs. 11,12); bronchial premalignant lesions (13); and lung cancer (14). There is significant overlap between bronchial and nasal smoking-and lung cancer-associated gene-expression changes (15), suggesting the ability to detect lung disease-related biology throughout the intra-and extra-thoracic airway.…”
Section: Introductionmentioning
confidence: 99%